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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
AT5G53910
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
AT5G53910
Arabidopsis thaliana
3.2e-133
475.7
231
100.0
AT1G18760
Arabidopsis thaliana
3.8e-17
90.1
247
30.0
AT1G21960
Arabidopsis thaliana
2.5e-16
87.4
230
29.6
AT1G18770
Arabidopsis thaliana
2.7e-15
84.0
90
44.4
AT2G29840
Arabidopsis thaliana
3.6e-15
83.6
106
38.7
AT3G13228
Arabidopsis thaliana
6.1e-15
82.8
164
31.1
AT1G18780
Arabidopsis thaliana
8.0e-15
82.4
93
44.1
AT5G08139
Arabidopsis thaliana
1.2e-10
68.6
81
35.8
AT3G19950
Arabidopsis thaliana
1.7e-09
64.7
57
38.6
AT5G02750
Arabidopsis thaliana
1.7e-09
64.7
55
43.6
AT5G60820
Arabidopsis thaliana
1.7e-09
64.7
48
47.9
AT5G56340
Arabidopsis thaliana
3.8e-09
63.5
59
37.3
AT4G26400
Arabidopsis thaliana
1.5e-08
61.6
55
38.2
AT5G59550
Arabidopsis thaliana
1.5e-08
61.6
57
40.4
WBGene00023404
Caenorhabditis elegans
1.5e-08
61.6
50
42.0
AT3G13430
Arabidopsis thaliana
2.5e-08
60.8
55
34.5
AT3G46620
Arabidopsis thaliana
2.5e-08
60.8
57
38.6
AT1G26800
Arabidopsis thaliana
5.6e-08
59.7
61
36.1
Ec-12_004750
Ectocarpus siliculosus
5.6e-08
59.7
49
40.8
pte588240
Paramecium tetraurelia
5.6e-08
59.7
55
41.8
AT1G14200
Arabidopsis thaliana
9.5e-08
58.9
49
42.9
AT1G45180
Arabidopsis thaliana
9.5e-08
58.9
65
38.5
ccr69680
Chondrus crispus
9.5e-08
58.9
60
40.0
FBgn0038627
Drosophila melanogaster
9.5e-08
58.9
53
39.6
AT1G55530
Arabidopsis thaliana
1.2e-07
58.5
50
32.0
AT3G02340
Arabidopsis thaliana
1.2e-07
58.5
58
37.9
Pp3c3_13100
Physcomitrella patens
2.1e-07
57.8
55
36.4
AA0006G05410
Aureococcus anophagefferens
3.6e-07
57.0
49
40.8
AT5G42940
Arabidopsis thaliana
3.6e-07
57.0
68
35.3
pte706380
Paramecium tetraurelia
3.6e-07
57.0
55
38.2
sya00G122820
Synedra acus
3.6e-07
57.0
50
42.0
AT1G68070
Arabidopsis thaliana
4.7e-07
56.6
45
40.0
AT1G68180
Arabidopsis thaliana
4.7e-07
56.6
48
43.8
AT2G01735
Arabidopsis thaliana
6.1e-07
56.2
45
40.0
AT5G01980
Arabidopsis thaliana
6.1e-07
56.2
49
44.9
Ec-27_004490
Ectocarpus siliculosus
6.1e-07
56.2
65
32.3
AT5G15820
Arabidopsis thaliana
8.0e-07
55.8
58
41.4
sya00G261570
Synedra acus
8.0e-07
55.8
62
35.5
fso92680
Fistulifera solaris
1.0e-06
55.5
41
48.8
Pp3s52_10
Physcomitrella patens
1.0e-06
55.5
118
27.1
Pp3c19_21510
Physcomitrella patens
1.0e-06
55.5
106
28.3
Pp3c3_10570
Physcomitrella patens
1.0e-06
55.5
118
27.1
WBGene00015194
Caenorhabditis elegans
1.4e-06
55.1
53
34.0
Pp3c13_19370
Physcomitrella patens
1.4e-06
55.1
59
33.9
ptri29870
Phaeodactylum tricornutum
1.4e-06
55.1
50
38.0
AT2G39720
Arabidopsis thaliana
1.8e-06
54.7
55
36.4
AT5G67120
Arabidopsis thaliana
1.8e-06
54.7
58
46.6
Pp3c4_17150
Physcomitrella patens
1.8e-06
54.7
46
37.0
pte260830
Paramecium tetraurelia
1.8e-06
54.7
54
38.9
AT2G15530
Arabidopsis thaliana
2.3e-06
54.3
47
42.6
sya00G186770
Synedra acus
2.3e-06
54.3
61
37.7
AT4G12190
Arabidopsis thaliana
3.0e-06
53.9
48
41.7
ccr92060
Chondrus crispus
3.0e-06
53.9
50
44.0
fso188980
Fistulifera solaris
3.0e-06
53.9
41
48.8
AT4G05350
Arabidopsis thaliana
4.0e-06
53.5
48
41.7
AT5G10650
Arabidopsis thaliana
4.0e-06
53.5
84
27.4
ENSG00000133874
Homo sapiens
4.0e-06
53.5
41
43.9
AT4G34040
Arabidopsis thaliana
5.2e-06
53.1
42
38.1
pte412900
Paramecium tetraurelia
5.2e-06
53.1
55
34.5
pte671870
Paramecium tetraurelia
5.2e-06
53.1
45
42.2
AT1G60360
Arabidopsis thaliana
6.8e-06
52.8
47
36.2
AT3G18930
Arabidopsis thaliana
6.8e-06
52.8
43
53.5
AT3G58720
Arabidopsis thaliana
6.8e-06
52.8
89
28.1
AT4G31450
Arabidopsis thaliana
6.8e-06
52.8
80
32.5
pte504670
Paramecium tetraurelia
6.8e-06
52.8
45
44.4
AT3G47990
Arabidopsis thaliana
8.9e-06
52.4
43
44.2
gsu37610
Galdieria sulphuraria
8.9e-06
52.4
55
38.2
ENSG00000101236
Homo sapiens
8.9e-06
52.4
41
43.9
Pp3c26_7240
Physcomitrella patens
8.9e-06
52.4
46
34.8
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (0 genes)
Thalassiosira oceanica (0 genes)
Pseudo-nitzschia multiseries (0 genes)
Fistulifera solaris (2 genes)
Fragilariopsis cylindrus (0 genes)
Cyclotella cryptica (0 genes)
Aureococcus anophagefferens (1 genes)
Ectocarpus siliculosus (2 genes)
Nannochloropsis gaditana (0 genes)
Homo sapiens (2 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (2 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (0 genes)
Arabidopsis thaliana (39 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (2 genes)
Galdieria sulphuraria (1 genes)
Emiliania huxleyi (0 genes)
Paramecium tetraurelia (6 genes)
Seminavis robusta (0 genes)
Synedra acus (3 genes)
Physcomitrella patens (7 genes)
Chlamydomonas reinhardtii (0 genes)
Pseudo-nitzschia multistriata (0 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing