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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
AT5G45400
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
AT5G45400
Arabidopsis thaliana
0.0e+00
1479.2
854
100.0
AT4G19130
Arabidopsis thaliana
1.2e-268
927.5
863
58.9
Pp3c20_10450
Physcomitrella patens
5.0e-179
629.8
745
47.9
Pp3c23_16880
Physcomitrella patens
4.7e-177
623.2
822
43.9
AT2G06510
Arabidopsis thaliana
7.7e-172
605.9
745
44.0
Cre17.g718850
Chlamydomonas reinhardtii
2.4e-96
355.1
473
39.3
ENSG00000132383
Homo sapiens
2.5e-90
335.1
443
39.5
YAR007C
Saccharomyces cerevisiae strain S288C
2.5e-82
308.5
465
36.3
AT5G08020
Arabidopsis thaliana
4.1e-80
301.2
466
35.2
AT5G61000
Arabidopsis thaliana
1.3e-78
296.2
462
34.6
Naga_100067g7
Nannochloropsis gaditana
1.4e-77
292.7
732
29.1
FBgn0010173
Drosophila melanogaster
2.7e-76
288.5
456
36.4
ps00G126120
Pseudo-nitzschia multiseries
1.5e-74
282.7
456
34.6
gene3215
Fragilariopsis cylindrus
3.7e-73
278.1
455
34.5
SPBC660.13c
Schizosaccharomyces pombe
3.7e-73
278.1
744
30.2
PSNMU-V1.4_AUG-EV-PASAV3_0122360
Pseudo-nitzschia multistriata
1.2e-71
273.1
479
33.6
Pp3c1_20770
Physcomitrella patens
1.5e-71
272.7
453
33.6
gsu10940
Galdieria sulphuraria
6.5e-70
267.3
746
28.3
tps198210
Thalassiosira pseudonana
6.5e-70
267.3
476
33.2
ptri80280
Phaeodactylum tricornutum
3.2e-69
265.0
493
33.5
fso41110
Fistulifera solaris
1.4e-67
259.6
453
34.7
fso181940
Fistulifera solaris
2.3e-67
258.8
453
34.7
AA0015G00520
Aureococcus anophagefferens
1.1e-66
256.5
451
34.8
Sro944_g222890
Seminavis robusta
1.1e-66
256.5
466
33.7
Sro773_g200410
Seminavis robusta
4.3e-66
254.6
761
28.0
sya00G127980
Synedra acus
8.2e-65
250.4
765
26.9
CC00G33490
Cyclotella cryptica
1.2e-63
246.5
756
27.0
sya00G143960
Synedra acus
1.5e-63
246.1
765
27.6
CM03G01230
Cyanidioschyzon merolae
2.9e-62
241.9
762
31.1
ccr116080
Chondrus crispus
2.5e-61
238.8
743
28.4
tho401580
Thalassiosira oceanica
1.4e-59
233.0
445
29.9
gene19869
Fragilariopsis cylindrus
5.9e-55
217.6
769
25.9
AA0022G00030
Aureococcus anophagefferens
3.3e-50
201.8
375
32.5
emh418280
Emiliania huxleyi
2.8e-49
198.7
489
30.1
emh82610
Emiliania huxleyi
3.7e-49
198.4
489
30.1
emh244200
Emiliania huxleyi
4.1e-48
194.9
463
30.7
WBGene00017546
Caenorhabditis elegans
2.7e-44
182.2
448
29.0
Cre16.g651000
Chlamydomonas reinhardtii
9.4e-37
157.1
462
25.1
pte565200
Paramecium tetraurelia
1.2e-34
150.2
421
26.1
pte570770
Paramecium tetraurelia
4.1e-32
141.7
426
24.6
WBGene00019858
Caenorhabditis elegans
6.4e-09
64.7
188
27.1
emh278560
Emiliania huxleyi
3.9e-06
55.5
114
30.7
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (1 genes)
Thalassiosira oceanica (1 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (2 genes)
Fragilariopsis cylindrus (2 genes)
Cyclotella cryptica (1 genes)
Aureococcus anophagefferens (2 genes)
Ectocarpus siliculosus (0 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (1 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (2 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (5 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (1 genes)
Galdieria sulphuraria (1 genes)
Emiliania huxleyi (4 genes)
Paramecium tetraurelia (2 genes)
Seminavis robusta (2 genes)
Synedra acus (2 genes)
Physcomitrella patens (3 genes)
Chlamydomonas reinhardtii (2 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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Genes only
Positions and Genes
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