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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
AT5G22470
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
AT5G22470
Arabidopsis thaliana
0.0e+00
1647.1
815
100.0
Pp3c1_22640
Physcomitrella patens
2.9e-200
700.3
776
45.0
AT2G31320
Arabidopsis thaliana
3.0e-93
344.7
756
31.7
Pp3c8_17220
Physcomitrella patens
2.9e-91
338.2
763
30.1
ENSG00000143799
Homo sapiens
3.8e-67
258.1
777
27.7
FBgn0010247
Drosophila melanogaster
8.4e-51
203.8
828
22.9
Pp3c22_13240
Physcomitrella patens
4.0e-37
158.3
494
26.1
AT4G02390
Arabidopsis thaliana
1.2e-36
156.8
496
24.8
ENSG00000129484
Homo sapiens
1.2e-33
146.7
532
25.6
pte591900
Paramecium tetraurelia
1.6e-33
146.4
354
27.7
pte237100
Paramecium tetraurelia
9.4e-26
120.6
362
24.9
pte68730
Paramecium tetraurelia
2.7e-25
119.0
493
21.5
pte427070
Paramecium tetraurelia
3.0e-24
115.5
491
22.4
WBGene00004049
Caenorhabditis elegans
6.7e-24
114.4
520
25.4
pte130650
Paramecium tetraurelia
6.7e-24
114.4
583
22.5
Sro1616_g286270
Seminavis robusta
3.3e-23
112.1
524
22.5
pte139850
Paramecium tetraurelia
5.7e-23
111.3
537
22.7
pte587580
Paramecium tetraurelia
6.3e-22
107.8
554
22.7
Sro633_g178800
Seminavis robusta
9.1e-21
104.0
493
23.1
pte447380
Paramecium tetraurelia
1.5e-20
103.2
628
22.0
pte409990
Paramecium tetraurelia
5.9e-20
101.3
625
21.8
ENSG00000041880
Homo sapiens
9.4e-18
94.0
535
21.9
pte733580
Paramecium tetraurelia
9.4e-18
94.0
521
21.5
emh663610
Emiliania huxleyi
7.9e-17
90.9
527
21.6
ccr70840
Chondrus crispus
3.9e-16
88.6
486
21.4
emh105980
Emiliania huxleyi
6.7e-16
87.8
373
22.3
emh410120
Emiliania huxleyi
7.4e-15
84.3
505
21.0
Sro1047_g235110
Seminavis robusta
4.5e-12
75.1
448
23.9
Sro1169_g248640
Seminavis robusta
2.9e-11
72.4
261
23.8
emh53760
Emiliania huxleyi
1.4e-10
70.1
159
30.2
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (0 genes)
Thalassiosira pseudonana (0 genes)
Thalassiosira oceanica (0 genes)
Pseudo-nitzschia multiseries (0 genes)
Fistulifera solaris (0 genes)
Fragilariopsis cylindrus (0 genes)
Cyclotella cryptica (0 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (0 genes)
Nannochloropsis gaditana (0 genes)
Homo sapiens (3 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (1 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (0 genes)
Arabidopsis thaliana (3 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (1 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (4 genes)
Paramecium tetraurelia (10 genes)
Seminavis robusta (4 genes)
Synedra acus (0 genes)
Physcomitrella patens (3 genes)
Chlamydomonas reinhardtii (0 genes)
Pseudo-nitzschia multistriata (0 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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Genes only
Positions and Genes
No editing