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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
AT5G08020
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
AT5G08020
Arabidopsis thaliana
0.0e+00
1175.6
605
100.0
AT5G61000
Arabidopsis thaliana
1.2e-288
993.4
631
81.1
Pp3c1_20770
Physcomitrella patens
8.8e-138
492.3
469
51.0
AT2G06510
Arabidopsis thaliana
8.6e-85
316.2
634
32.5
Pp3c23_16880
Physcomitrella patens
6.2e-83
310.1
460
36.7
Pp3c20_10450
Physcomitrella patens
1.3e-80
302.4
463
35.4
AT4G19130
Arabidopsis thaliana
3.5e-78
294.3
467
35.5
AT5G45400
Arabidopsis thaliana
1.1e-76
289.3
466
35.2
ENSG00000132383
Homo sapiens
3.4e-73
277.7
476
35.5
Naga_100067g7
Nannochloropsis gaditana
4.4e-73
277.3
620
30.2
SPBC660.13c
Schizosaccharomyces pombe
1.5e-68
262.3
622
30.7
gsu10940
Galdieria sulphuraria
9.0e-66
253.1
635
28.8
YAR007C
Saccharomyces cerevisiae strain S288C
1.3e-64
249.2
452
34.3
gene3215
Fragilariopsis cylindrus
1.4e-63
245.7
613
27.4
FBgn0010173
Drosophila melanogaster
3.2e-63
244.6
619
28.6
ps00G126120
Pseudo-nitzschia multiseries
2.7e-62
241.5
629
27.3
CM03G01230
Cyanidioschyzon merolae
1.0e-61
239.6
618
29.3
PSNMU-V1.4_AUG-EV-PASAV3_0122360
Pseudo-nitzschia multistriata
4.3e-60
234.2
655
26.3
CC00G33490
Cyclotella cryptica
6.2e-59
230.3
618
26.9
fso181940
Fistulifera solaris
1.1e-58
229.6
660
27.3
fso41110
Fistulifera solaris
1.8e-58
228.8
658
27.2
tps198210
Thalassiosira pseudonana
2.9e-56
221.5
595
27.2
Cre16.g651000
Chlamydomonas reinhardtii
1.2e-54
216.1
624
26.1
Sro773_g200410
Seminavis robusta
1.2e-54
216.1
462
31.0
ptri80280
Phaeodactylum tricornutum
1.6e-54
215.7
629
27.8
AA0015G00520
Aureococcus anophagefferens
6.7e-53
210.3
445
31.9
sya00G143960
Synedra acus
2.5e-52
208.4
644
27.2
ccr116080
Chondrus crispus
9.6e-52
206.5
449
31.4
sya00G127980
Synedra acus
1.6e-51
205.7
644
26.7
emh418280
Emiliania huxleyi
4.8e-51
204.1
609
26.8
emh82610
Emiliania huxleyi
6.2e-51
203.8
609
26.8
Cre17.g718850
Chlamydomonas reinhardtii
6.9e-50
200.3
466
29.0
Sro944_g222890
Seminavis robusta
1.2e-49
199.5
465
28.2
tho401580
Thalassiosira oceanica
3.4e-49
198.0
446
28.7
gene19869
Fragilariopsis cylindrus
3.5e-46
188.0
556
26.4
AA0022G00030
Aureococcus anophagefferens
3.0e-45
184.9
369
32.5
WBGene00017546
Caenorhabditis elegans
1.3e-40
169.5
480
29.8
emh244200
Emiliania huxleyi
1.1e-36
156.4
445
28.3
pte321820
Paramecium tetraurelia
1.4e-31
139.4
448
26.1
pte565200
Paramecium tetraurelia
7.2e-31
137.1
442
24.7
pte570770
Paramecium tetraurelia
3.1e-26
121.7
446
25.1
AT1G52950
Arabidopsis thaliana
1.5e-15
86.3
417
23.0
pte664000
Paramecium tetraurelia
2.0e-09
65.9
427
18.5
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (1 genes)
Thalassiosira oceanica (1 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (2 genes)
Fragilariopsis cylindrus (2 genes)
Cyclotella cryptica (1 genes)
Aureococcus anophagefferens (2 genes)
Ectocarpus siliculosus (0 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (1 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (1 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (6 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (1 genes)
Galdieria sulphuraria (1 genes)
Emiliania huxleyi (3 genes)
Paramecium tetraurelia (4 genes)
Seminavis robusta (2 genes)
Synedra acus (2 genes)
Physcomitrella patens (3 genes)
Chlamydomonas reinhardtii (2 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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Genes only
Positions and Genes
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