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Interactive Phylogenetics Module
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
AT4G34460
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
AT4G34460
Arabidopsis thaliana
2.4e-226
785.8
378
100.0
Pp3c2_6210
Physcomitrella patens
3.1e-109
396.7
379
53.6
AA0051G00360
Aureococcus anophagefferens
3.5e-76
287.0
311
45.3
emh383700
Emiliania huxleyi
6.0e-76
286.2
362
43.1
emh66620
Emiliania huxleyi
6.0e-76
286.2
362
43.1
AA0039G00160
Aureococcus anophagefferens
1.5e-74
281.6
312
45.2
CC00G13560
Cyclotella cryptica
2.1e-65
251.1
366
39.1
tho03160
Thalassiosira oceanica
1.4e-64
248.4
313
43.1
tps21230
Thalassiosira pseudonana
1.8e-64
248.1
312
43.3
Ec-16_001710
Ectocarpus siliculosus
9.9e-63
242.3
368
38.9
ENSG00000069966
Homo sapiens
5.1e-59
229.9
374
36.9
ENSG00000111664
Homo sapiens
8.1e-57
222.6
310
40.3
gene3334
Fragilariopsis cylindrus
1.8e-56
221.5
393
33.1
gene2763
Fragilariopsis cylindrus
5.3e-56
219.9
394
33.2
ENSG00000114450
Homo sapiens
6.9e-56
219.5
320
38.8
ENSG00000078369
Homo sapiens
3.4e-55
217.2
369
35.8
Pp3c1_35990
Physcomitrella patens
6.0e-52
206.5
154
61.0
YOR212W
Saccharomyces cerevisiae strain S288C
8.7e-51
202.6
407
31.0
ENSG00000172354
Homo sapiens
6.2e-49
196.4
366
34.2
WBGene00001680
Caenorhabditis elegans
1.8e-48
194.9
352
35.2
fso195740
Fistulifera solaris
1.2e-47
192.2
376
33.5
fso128230
Fistulifera solaris
2.0e-47
191.4
376
33.2
FBgn0030011
Drosophila melanogaster
2.6e-47
191.0
362
29.8
FBgn0001105
Drosophila melanogaster
7.6e-47
189.5
355
33.8
WBGene00001679
Caenorhabditis elegans
3.8e-46
187.2
354
32.5
SPBC32H8.07
Schizosaccharomyces pombe
8.4e-46
186.0
314
34.1
PSNMU-V1.4_AUG-EV-PASAV3_0073610
Pseudo-nitzschia multistriata
3.2e-45
184.1
326
35.3
Sro795_g203560
Seminavis robusta
9.3e-45
182.6
381
31.5
ptri88800
Phaeodactylum tricornutum
1.9e-42
174.9
386
32.4
ps00G159050
Pseudo-nitzschia multiseries
3.3e-42
174.1
331
34.1
sya00G202300
Synedra acus
1.6e-36
155.2
314
29.6
emh211780
Emiliania huxleyi
2.5e-34
147.9
327
29.7
emh167290
Emiliania huxleyi
3.3e-34
147.5
327
29.7
FBgn0004623
Drosophila melanogaster
2.1e-33
144.8
310
29.0
Naga_100002g133
Nannochloropsis gaditana
2.1e-33
144.8
307
31.9
AA0002G06910
Aureococcus anophagefferens
7.7e-23
109.8
278
30.6
pte530450
Paramecium tetraurelia
3.6e-20
100.9
287
27.5
AA0007G03980
Aureococcus anophagefferens
1.7e-14
82.0
284
28.9
Pp3c3_13590
Physcomitrella patens
2.2e-14
81.6
276
27.5
gsu30210
Galdieria sulphuraria
2.9e-14
81.3
336
24.7
gsu30230
Galdieria sulphuraria
2.9e-14
81.3
336
24.7
fso95120
Fistulifera solaris
1.4e-13
79.0
220
29.1
Sro3059_g342930
Seminavis robusta
1.4e-13
79.0
265
24.9
emh622180
Emiliania huxleyi
1.9e-13
78.6
317
24.9
AT1G04510
Arabidopsis thaliana
5.5e-13
77.0
236
27.1
emh570520
Emiliania huxleyi
5.5e-13
77.0
324
26.5
emh131950
Emiliania huxleyi
5.5e-13
77.0
324
26.5
ps00G172440
Pseudo-nitzschia multiseries
5.5e-13
77.0
286
26.6
FBgn0034876
Drosophila melanogaster
7.2e-13
76.6
271
24.0
AT3G15610
Arabidopsis thaliana
9.4e-13
76.3
250
25.2
Pp3c26_8130
Physcomitrella patens
9.4e-13
76.3
276
27.2
AT1G15470
Arabidopsis thaliana
2.1e-12
75.1
279
23.7
CC00G198600
Cyclotella cryptica
2.1e-12
75.1
282
23.0
emh499270
Emiliania huxleyi
2.7e-12
74.7
271
25.5
gene7370
Fragilariopsis cylindrus
4.7e-12
73.9
219
27.9
ptri80520
Phaeodactylum tricornutum
4.7e-12
73.9
272
24.6
Cre12.g487200
Chlamydomonas reinhardtii
6.1e-12
73.6
264
26.1
gsu138690
Galdieria sulphuraria
6.1e-12
73.6
254
26.4
Sro1558_g282360
Seminavis robusta
6.1e-12
73.6
277
23.5
Sro576_g169520
Seminavis robusta
7.9e-12
73.2
284
26.4
SPBC21B10.05c
Schizosaccharomyces pombe
1.0e-11
72.8
203
27.1
AT1G52730
Arabidopsis thaliana
2.3e-11
71.6
250
24.0
emh29410
Emiliania huxleyi
3.9e-11
70.9
262
26.7
gsu98470
Galdieria sulphuraria
3.9e-11
70.9
274
26.6
WBGene00006386
Caenorhabditis elegans
5.1e-11
70.5
217
24.0
FBgn0023527
Drosophila melanogaster
5.1e-11
70.5
216
27.3
ENSG00000105447
Homo sapiens
5.1e-11
70.5
194
28.9
fso181840
Fistulifera solaris
6.7e-11
70.1
270
21.9
WBGene00019434
Caenorhabditis elegans
1.5e-10
68.9
283
26.1
gsu06100
Galdieria sulphuraria
1.5e-10
68.9
133
32.3
gsu06120
Galdieria sulphuraria
1.5e-10
68.9
133
32.3
AT2G32950
Arabidopsis thaliana
3.3e-10
67.8
263
24.3
ccr153540
Chondrus crispus
3.3e-10
67.8
279
24.7
FBgn0034527
Drosophila melanogaster
4.4e-10
67.4
400
22.2
fso41210
Fistulifera solaris
4.4e-10
67.4
270
22.2
Pp3c1_37340
Physcomitrella patens
5.7e-10
67.0
300
22.7
ENSG00000085433
Homo sapiens
7.4e-10
66.6
178
33.1
AA0078G00030
Aureococcus anophagefferens
9.7e-10
66.2
211
25.6
FBgn0020618
Drosophila melanogaster
1.7e-09
65.5
175
27.4
FBgn0046222
Drosophila melanogaster
1.7e-09
65.5
319
22.3
ps00G187290
Pseudo-nitzschia multiseries
1.7e-09
65.5
173
30.6
sya00G144840
Synedra acus
1.7e-09
65.5
234
26.9
tho288600
Thalassiosira oceanica
1.7e-09
65.5
269
23.4
ENSG00000136709
Homo sapiens
2.2e-09
65.1
170
30.6
ENSG00000127837
Homo sapiens
2.2e-09
65.1
274
25.5
sya00G18190
Synedra acus
2.2e-09
65.1
257
26.1
sya00G70860
Synedra acus
2.2e-09
65.1
243
25.1
AT3G27640
Arabidopsis thaliana
2.8e-09
64.7
302
25.8
AT5G67320
Arabidopsis thaliana
2.8e-09
64.7
324
23.1
ccr159940
Chondrus crispus
2.8e-09
64.7
212
26.4
emh262130
Emiliania huxleyi
2.8e-09
64.7
261
27.2
fso80290
Fistulifera solaris
2.8e-09
64.7
322
20.5
fso167980
Fistulifera solaris
2.8e-09
64.7
330
22.1
WBGene00021074
Caenorhabditis elegans
3.7e-09
64.3
315
21.6
fso145630
Fistulifera solaris
3.7e-09
64.3
264
23.5
sya00G193460
Synedra acus
3.7e-09
64.3
243
25.1
Pp3c14_22340
Physcomitrella patens
4.8e-09
63.9
298
22.8
emh595350
Emiliania huxleyi
6.3e-09
63.5
218
24.8
FBgn0034931
Drosophila melanogaster
8.2e-09
63.2
234
24.8
emh279760
Emiliania huxleyi
8.2e-09
63.2
190
29.5
Pp3c11_15840
Physcomitrella patens
8.2e-09
63.2
262
22.1
AT1G10580
Arabidopsis thaliana
1.1e-08
62.8
317
22.1
pte493450
Paramecium tetraurelia
1.4e-08
62.4
127
29.1
tps77780
Thalassiosira pseudonana
1.8e-08
62.0
262
22.9
WBGene00010631
Caenorhabditis elegans
2.4e-08
61.6
313
23.0
Cre17.g710100
Chlamydomonas reinhardtii
2.4e-08
61.6
239
23.8
ptri234630
Phaeodactylum tricornutum
2.4e-08
61.6
167
31.1
CM18G01850
Cyanidioschyzon merolae
3.1e-08
61.2
179
26.3
Cre10.g434600
Chlamydomonas reinhardtii
3.1e-08
61.2
343
19.8
ENSG00000101849
Homo sapiens
3.1e-08
61.2
215
26.5
Pp3c15_19270
Physcomitrella patens
3.1e-08
61.2
223
23.8
ccr130780
Chondrus crispus
4.1e-08
60.8
177
27.7
Cre06.g278176
Chlamydomonas reinhardtii
4.1e-08
60.8
148
27.7
CC00G90280
Cyclotella cryptica
4.1e-08
60.8
281
24.2
emh578610
Emiliania huxleyi
4.1e-08
60.8
243
23.0
ENSG00000023734
Homo sapiens
4.1e-08
60.8
269
21.9
SPBC18H10.05
Schizosaccharomyces pombe
5.3e-08
60.5
290
23.1
Ec-17_002790
Ectocarpus siliculosus
7.0e-08
60.1
160
29.4
WBGene00018891
Caenorhabditis elegans
9.1e-08
59.7
169
24.9
WBGene00011051
Caenorhabditis elegans
9.1e-08
59.7
170
26.5
Cre06.g255400
Chlamydomonas reinhardtii
9.1e-08
59.7
290
19.7
AA0035G00230
Aureococcus anophagefferens
1.2e-07
59.3
278
24.5
CC00G57920
Cyclotella cryptica
1.2e-07
59.3
239
27.2
fso30640
Fistulifera solaris
1.2e-07
59.3
326
21.8
ENSG00000103426
Homo sapiens
1.2e-07
59.3
202
27.7
ENSG00000262246
Homo sapiens
1.2e-07
59.3
202
27.7
ENSG00000278760
Homo sapiens
1.2e-07
59.3
202
27.7
ENSG00000282725
Homo sapiens
1.2e-07
59.3
202
27.7
Pp3c2_24290
Physcomitrella patens
1.2e-07
59.3
254
22.8
pte410590
Paramecium tetraurelia
1.2e-07
59.3
122
28.7
ptri188100
Phaeodactylum tricornutum
1.2e-07
59.3
261
21.8
FBgn0028496
Drosophila melanogaster
1.6e-07
58.9
173
28.3
Ec-24_001620
Ectocarpus siliculosus
1.6e-07
58.9
122
32.8
gsu79810
Galdieria sulphuraria
1.6e-07
58.9
175
29.7
AA0002G04370
Aureococcus anophagefferens
2.0e-07
58.5
195
29.7
CM17G00500
Cyanidioschyzon merolae
2.0e-07
58.5
276
27.2
Cre06.g278222
Chlamydomonas reinhardtii
2.0e-07
58.5
131
32.1
fso119410
Fistulifera solaris
2.0e-07
58.5
323
21.7
Pp3c10_5380
Physcomitrella patens
2.0e-07
58.5
90
37.8
Pp3c17_19090
Physcomitrella patens
2.6e-07
58.2
300
23.0
Pp3c19_4130
Physcomitrella patens
2.6e-07
58.2
169
26.0
Pp3c7_14320
Physcomitrella patens
2.6e-07
58.2
252
22.2
Pp3c9_18230
Physcomitrella patens
2.6e-07
58.2
153
29.4
pte45090
Paramecium tetraurelia
2.6e-07
58.2
133
31.6
pte590660
Paramecium tetraurelia
2.6e-07
58.2
133
31.6
PSNMU-V1.4_AUG-EV-PASAV3_0029630
Pseudo-nitzschia multistriata
3.5e-07
57.8
240
23.3
Pp3c15_21840
Physcomitrella patens
3.5e-07
57.8
334
20.1
ptri43610
Phaeodactylum tricornutum
3.5e-07
57.8
333
21.3
Ec-26_002740
Ectocarpus siliculosus
4.5e-07
57.4
225
26.7
Pp3c14_5270
Physcomitrella patens
4.5e-07
57.4
89
36.0
pte151690
Paramecium tetraurelia
4.5e-07
57.4
175
28.6
YNL006W
Saccharomyces cerevisiae strain S288C
4.5e-07
57.4
203
25.1
sya00G53830
Synedra acus
4.5e-07
57.4
265
21.9
Ec-07_003630
Ectocarpus siliculosus
5.9e-07
57.0
237
24.1
Pp3c21_4780
Physcomitrella patens
7.7e-07
56.6
168
26.2
ptri206590
Phaeodactylum tricornutum
7.7e-07
56.6
218
25.2
YDR364C
Saccharomyces cerevisiae strain S288C
7.7e-07
56.6
240
23.8
tho348660
Thalassiosira oceanica
7.7e-07
56.6
268
25.4
gsu137090
Galdieria sulphuraria
1.0e-06
56.2
233
24.5
AT5G14530
Arabidopsis thaliana
1.3e-06
55.8
168
28.6
emh406020
Emiliania huxleyi
1.3e-06
55.8
260
25.4
FBgn0044323
Drosophila melanogaster
1.7e-06
55.5
302
21.2
ENSG00000090372
Homo sapiens
1.7e-06
55.5
258
23.6
WBGene00002223
Caenorhabditis elegans
2.2e-06
55.1
196
28.6
WBGene00008586
Caenorhabditis elegans
2.2e-06
55.1
128
28.9
tps75740
Thalassiosira pseudonana
2.2e-06
55.1
127
31.5
AT5G15550
Arabidopsis thaliana
2.9e-06
54.7
180
27.2
Cre17.g723450
Chlamydomonas reinhardtii
2.9e-06
54.7
218
23.9
FBgn0032298
Drosophila melanogaster
2.9e-06
54.7
174
26.4
emh765410
Emiliania huxleyi
2.9e-06
54.7
134
27.6
Naga_100013g31
Nannochloropsis gaditana
2.9e-06
54.7
102
31.4
CC00G145360
Cyclotella cryptica
3.8e-06
54.3
171
25.7
ENSG00000065268
Homo sapiens
3.8e-06
54.3
230
24.3
pte743540
Paramecium tetraurelia
3.8e-06
54.3
248
21.8
Sro1_g000700
Seminavis robusta
3.8e-06
54.3
117
32.5
AT5G42010
Arabidopsis thaliana
5.0e-06
53.9
283
24.0
AT5G56190
Arabidopsis thaliana
5.0e-06
53.9
169
26.0
ccr146340
Chondrus crispus
5.0e-06
53.9
58
41.4
SPBC609.03
Schizosaccharomyces pombe
5.0e-06
53.9
225
27.6
ccr25300
Chondrus crispus
6.5e-06
53.5
65
38.5
CM18G00670
Cyanidioschyzon merolae
6.5e-06
53.5
204
27.5
Ec-19_003760
Ectocarpus siliculosus
6.5e-06
53.5
228
25.9
Sro465_g148630
Seminavis robusta
6.5e-06
53.5
274
21.2
AT5G16750
Arabidopsis thaliana
8.5e-06
53.1
142
26.1
Cre06.g251951
Chlamydomonas reinhardtii
8.5e-06
53.1
152
25.0
sya00G233660
Synedra acus
8.5e-06
53.1
313
21.7
tho61580
Thalassiosira oceanica
8.5e-06
53.1
274
21.5
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (6 genes)
Thalassiosira pseudonana (3 genes)
Thalassiosira oceanica (4 genes)
Pseudo-nitzschia multiseries (3 genes)
Fistulifera solaris (10 genes)
Fragilariopsis cylindrus (3 genes)
Cyclotella cryptica (5 genes)
Aureococcus anophagefferens (7 genes)
Ectocarpus siliculosus (6 genes)
Nannochloropsis gaditana (2 genes)
Homo sapiens (17 genes)
Drosophila melanogaster (12 genes)
Caenorhabditis elegans (10 genes)
Saccharomyces cerevisiae strain S288C (3 genes)
Schizosaccharomyces pombe (4 genes)
Arabidopsis thaliana (14 genes)
Cyanidioschyzon merolae (3 genes)
Chondrus crispus (5 genes)
Galdieria sulphuraria (8 genes)
Emiliania huxleyi (15 genes)
Paramecium tetraurelia (7 genes)
Seminavis robusta (6 genes)
Synedra acus (7 genes)
Physcomitrella patens (17 genes)
Chlamydomonas reinhardtii (8 genes)
Pseudo-nitzschia multistriata (2 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing