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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
AT4G25640
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
AT4G25640
Arabidopsis thaliana
7.9e-289
993.8
515
100.0
AT4G00350
Arabidopsis thaliana
3.7e-177
622.9
463
67.8
AT1G47530
Arabidopsis thaliana
1.7e-134
481.1
481
51.6
AT5G38030
Arabidopsis thaliana
5.4e-128
459.5
464
50.9
AT3G26590
Arabidopsis thaliana
9.2e-128
458.8
488
48.6
AT1G12950
Arabidopsis thaliana
8.6e-126
452.2
472
49.2
AT1G23300
Arabidopsis thaliana
4.3e-125
449.9
473
49.3
AT5G65380
Arabidopsis thaliana
1.5e-109
398.3
455
48.1
AT5G10420
Arabidopsis thaliana
3.6e-108
393.7
477
45.9
AT1G33110
Arabidopsis thaliana
4.7e-108
393.3
468
44.9
AT1G33100
Arabidopsis thaliana
6.2e-108
392.9
487
44.1
AT3G21690
Arabidopsis thaliana
8.1e-108
392.5
482
45.0
AT1G33090
Arabidopsis thaliana
4.4e-106
386.7
481
44.5
AT5G44050
Arabidopsis thaliana
2.9e-105
384.0
477
44.0
AT1G11670
Arabidopsis thaliana
6.4e-105
382.9
445
46.1
AT1G61890
Arabidopsis thaliana
6.4e-105
382.9
441
45.8
AT1G33080
Arabidopsis thaliana
7.8e-95
349.4
471
41.8
AT4G21903
Arabidopsis thaliana
1.6e-92
341.7
440
43.4
AT4G21910
Arabidopsis thaliana
2.1e-92
341.3
446
43.3
AT3G59030
Arabidopsis thaliana
7.8e-87
322.8
459
40.1
AT3G03620
Arabidopsis thaliana
2.3e-86
321.2
463
38.4
Pp3c17_22040
Physcomitrella patens
1.1e-75
285.8
442
40.3
AT5G17700
Arabidopsis thaliana
1.1e-72
275.8
474
36.7
Pp3c4_16610
Physcomitrella patens
5.5e-72
273.5
461
37.7
Pp3c10_15660
Physcomitrella patens
6.0e-71
270.0
459
37.5
AT1G73700
Arabidopsis thaliana
1.0e-70
269.2
464
36.4
Pp3c2_12080
Physcomitrella patens
1.1e-69
265.8
442
37.8
Pp3c1_37590
Physcomitrella patens
7.4e-69
263.1
435
37.9
Pp3c14_17840
Physcomitrella patens
2.8e-68
261.2
456
35.3
AT5G52450
Arabidopsis thaliana
8.2e-68
259.6
440
36.4
AT1G15170
Arabidopsis thaliana
9.3e-64
246.1
454
35.0
AT1G15150
Arabidopsis thaliana
7.9e-63
243.0
467
34.0
AT1G15180
Arabidopsis thaliana
1.9e-61
238.4
454
34.1
AT1G15160
Arabidopsis thaliana
3.3e-61
237.7
467
34.0
AT1G71140
Arabidopsis thaliana
4.1e-59
230.7
446
33.0
AT2G34360
Arabidopsis thaliana
5.3e-59
230.3
449
34.3
AT2G04080
Arabidopsis thaliana
5.9e-58
226.9
445
32.4
AT3G23560
Arabidopsis thaliana
7.6e-58
226.5
467
32.8
AT2G04050
Arabidopsis thaliana
3.8e-57
224.2
445
33.0
AT2G04040
Arabidopsis thaliana
2.5e-56
221.5
445
32.6
AT3G23550
Arabidopsis thaliana
2.5e-56
221.5
474
32.7
AT1G66760
Arabidopsis thaliana
2.1e-55
218.4
470
31.7
AT1G66780
Arabidopsis thaliana
1.0e-54
216.1
435
31.3
Pp3c12_15740
Physcomitrella patens
3.0e-54
214.5
465
34.6
Cre10.g444900
Chlamydomonas reinhardtii
6.3e-52
206.8
454
31.3
AT2G04100
Arabidopsis thaliana
3.1e-51
204.5
458
31.4
AT2G04090
Arabidopsis thaliana
5.3e-51
203.8
437
31.6
AT1G64820
Arabidopsis thaliana
6.9e-51
203.4
441
28.8
Pp3c10_17490
Physcomitrella patens
2.2e-49
198.4
436
33.3
AT2G04070
Arabidopsis thaliana
6.5e-49
196.8
445
31.0
AT1G58340
Arabidopsis thaliana
9.4e-48
193.0
454
30.0
Pp3c1_37630
Physcomitrella patens
2.7e-47
191.4
323
37.5
Cre01.g014150
Chlamydomonas reinhardtii
1.5e-42
175.6
467
28.9
AT4G23030
Arabidopsis thaliana
1.3e-41
172.6
445
28.5
AT5G19700
Arabidopsis thaliana
3.6e-39
164.5
437
28.6
Sro15_g011090
Seminavis robusta
4.7e-39
164.1
431
27.1
ENSG00000142494
Homo sapiens
1.4e-38
162.5
470
27.7
Cre12.g523250
Chlamydomonas reinhardtii
7.4e-37
156.8
469
27.5
Cre01.g027764
Chlamydomonas reinhardtii
1.3e-36
156.0
445
28.1
AT1G71870
Arabidopsis thaliana
6.3e-36
153.7
474
25.5
Pp3c6_11630
Physcomitrella patens
2.4e-35
151.8
440
26.1
Pp3c14_23000
Physcomitrella patens
3.1e-35
151.4
476
23.7
AT5G49130
Arabidopsis thaliana
7.0e-35
150.2
448
24.3
AT4G29140
Arabidopsis thaliana
1.6e-34
149.1
457
26.5
AT4G22790
Arabidopsis thaliana
4.5e-34
147.5
437
27.5
Pp3c10_10570
Physcomitrella patens
5.9e-34
147.1
446
24.2
AT2G38510
Arabidopsis thaliana
7.7e-34
146.7
441
25.4
SPCC4B3.13
Schizosaccharomyces pombe
1.3e-33
146.0
463
26.1
Cre12.g499700
Chlamydomonas reinhardtii
2.2e-33
145.2
462
27.3
Cre14.g625350
Chlamydomonas reinhardtii
2.3e-30
135.2
447
26.8
Pp3c5_21630
Physcomitrella patens
4.0e-30
134.4
434
24.4
tps50240
Thalassiosira pseudonana
4.0e-30
134.4
467
25.1
AT5G52050
Arabidopsis thaliana
2.6e-29
131.7
479
24.2
SPAC11D3.06
Schizosaccharomyces pombe
7.5e-29
130.2
445
27.0
tho111840
Thalassiosira oceanica
1.3e-28
129.4
451
27.1
Cre01.g051211
Chlamydomonas reinhardtii
5.3e-27
124.0
442
27.1
tps31150
Thalassiosira pseudonana
7.0e-27
123.6
414
26.6
ENSG00000180638
Homo sapiens
1.3e-25
119.4
499
24.2
gsu135060
Galdieria sulphuraria
5.5e-24
114.0
480
27.1
Cre10.g445850
Chlamydomonas reinhardtii
3.6e-23
111.3
489
24.7
SPAC323.07c
Schizosaccharomyces pombe
3.6e-23
111.3
463
25.9
CC00G60790
Cyclotella cryptica
6.1e-23
110.5
503
24.1
CC00G114010
Cyclotella cryptica
1.0e-22
109.8
423
24.3
Naga_100053g11
Nannochloropsis gaditana
5.7e-21
104.0
530
23.0
YDR338C
Saccharomyces cerevisiae strain S288C
6.3e-20
100.5
463
24.8
AA0058G00220
Aureococcus anophagefferens
1.0e-17
93.2
380
25.5
Cre14.g610750
Chlamydomonas reinhardtii
1.0e-17
93.2
495
24.8
Ec-23_000920
Ectocarpus siliculosus
1.3e-17
92.8
432
24.3
emh649060
Emiliania huxleyi
2.3e-17
92.0
402
25.1
pte106630
Paramecium tetraurelia
1.6e-15
85.9
437
24.3
tho01400
Thalassiosira oceanica
3.6e-15
84.7
154
33.1
AA0006G00310
Aureococcus anophagefferens
4.7e-15
84.3
396
25.8
Sro1515_g279010
Seminavis robusta
4.7e-15
84.3
390
23.8
tho486100
Thalassiosira oceanica
8.0e-15
83.6
236
27.1
Cre03.g205850
Chlamydomonas reinhardtii
2.0e-13
79.0
217
27.6
tho117820
Thalassiosira oceanica
7.5e-13
77.0
162
30.9
emh543580
Emiliania huxleyi
1.3e-12
76.3
434
25.3
emh446400
Emiliania huxleyi
1.3e-12
76.3
498
24.1
emh230720
Emiliania huxleyi
1.3e-12
76.3
498
24.1
pte774970
Paramecium tetraurelia
2.8e-12
75.1
458
23.4
emh654810
Emiliania huxleyi
4.9e-12
74.3
321
24.6
pte367570
Paramecium tetraurelia
8.3e-12
73.6
382
23.6
AT2G04066
Arabidopsis thaliana
1.1e-11
73.2
151
31.1
pte205960
Paramecium tetraurelia
3.1e-11
71.6
414
23.2
YHR032W
Saccharomyces cerevisiae strain S288C
1.6e-10
69.3
389
22.4
gene1184
Fragilariopsis cylindrus
2.7e-10
68.6
448
22.3
ps00G102360
Pseudo-nitzschia multiseries
7.8e-10
67.0
459
25.5
ptri160050
Phaeodactylum tricornutum
2.9e-09
65.1
468
23.9
Cre01.g007901
Chlamydomonas reinhardtii
3.8e-09
64.7
221
24.9
PSNMU-V1.4_AUG-EV-PASAV3_0074190
Pseudo-nitzschia multistriata
1.5e-08
62.8
443
20.8
pte637280
Paramecium tetraurelia
4.3e-08
61.2
377
22.0
fso14910
Fistulifera solaris
1.2e-07
59.7
473
22.6
tps68270
Thalassiosira pseudonana
2.8e-07
58.5
459
22.4
fso134100
Fistulifera solaris
3.6e-07
58.2
455
23.5
pte386580
Paramecium tetraurelia
3.6e-07
58.2
463
21.6
Sro64_g036510
Seminavis robusta
1.0e-06
56.6
461
21.0
pte370010
Paramecium tetraurelia
4.0e-06
54.7
475
21.9
sya00G117220
Synedra acus
4.0e-06
54.7
378
23.8
CC00G106900
Cyclotella cryptica
6.8e-06
53.9
469
20.0
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (3 genes)
Thalassiosira oceanica (4 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (2 genes)
Fragilariopsis cylindrus (1 genes)
Cyclotella cryptica (3 genes)
Aureococcus anophagefferens (2 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (2 genes)
Drosophila melanogaster (0 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (2 genes)
Schizosaccharomyces pombe (3 genes)
Arabidopsis thaliana (51 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (1 genes)
Emiliania huxleyi (5 genes)
Paramecium tetraurelia (7 genes)
Seminavis robusta (3 genes)
Synedra acus (1 genes)
Physcomitrella patens (13 genes)
Chlamydomonas reinhardtii (11 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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Genes only
Positions and Genes
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