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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
AT4G12620
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
AT4G12620
Arabidopsis thaliana
0.0e+00
1565.4
814
100.0
AT4G14700
Arabidopsis thaliana
0.0e+00
1360.5
817
89.1
Pp3c9_1080
Physcomitrella patens
6.0e-190
666.0
752
48.9
Cre10.g455600
Chlamydomonas reinhardtii
2.9e-83
311.6
753
29.5
FBgn0022772
Drosophila melanogaster
4.1e-82
307.8
385
43.4
ENSG00000085840
Homo sapiens
2.5e-79
298.5
383
40.2
SPBC29A10.15
Schizosaccharomyces pombe
4.4e-68
261.2
398
38.4
emh543520
Emiliania huxleyi
1.1e-58
229.9
331
38.1
Ec-19_002950
Ectocarpus siliculosus
1.9e-58
229.2
413
34.1
ccr137600
Chondrus crispus
5.1e-56
221.1
397
34.8
gsu44760
Galdieria sulphuraria
1.7e-48
196.1
387
34.6
CM19G01120
Cyanidioschyzon merolae
1.1e-45
186.8
300
36.7
YML065W
Saccharomyces cerevisiae strain S288C
2.6e-44
182.2
275
36.7
CC00G119650
Cyclotella cryptica
1.2e-41
173.3
382
33.8
sya00G191700
Synedra acus
3.0e-40
168.7
399
33.6
ptri153720
Phaeodactylum tricornutum
6.7e-40
167.5
305
34.8
pte302880
Paramecium tetraurelia
2.5e-39
165.6
367
29.2
WBGene00012650
Caenorhabditis elegans
1.6e-38
162.9
284
36.6
pte188780
Paramecium tetraurelia
2.1e-38
162.5
370
28.6
tho98200
Thalassiosira oceanica
3.7e-38
161.8
340
32.1
pte420250
Paramecium tetraurelia
1.1e-37
160.2
338
31.4
pte308340
Paramecium tetraurelia
1.4e-37
159.8
335
30.7
Sro992_g228860
Seminavis robusta
2.4e-37
159.1
320
30.3
tps09600
Thalassiosira pseudonana
2.4e-37
159.1
299
34.1
Pp3c2_14050
Physcomitrella patens
4.0e-37
158.3
417
26.1
tho123460
Thalassiosira oceanica
4.5e-36
154.8
356
30.3
gene1353
Fragilariopsis cylindrus
2.2e-35
152.5
254
34.6
ENSG00000094804
Homo sapiens
2.2e-35
152.5
421
26.1
fso05250
Fistulifera solaris
4.9e-35
151.4
334
31.4
fso104310
Fistulifera solaris
8.4e-35
150.6
335
31.3
AT1G07270
Arabidopsis thaliana
6.0e-33
144.4
395
25.3
ccr76820
Chondrus crispus
1.2e-28
130.2
244
36.1
Naga_100811g4
Nannochloropsis gaditana
2.0e-28
129.4
253
32.4
SPBC14C8.07c
Schizosaccharomyces pombe
5.0e-27
124.8
380
27.4
Ec-04_006400
Ectocarpus siliculosus
7.2e-26
120.9
280
28.2
FBgn0035918
Drosophila melanogaster
2.1e-25
119.4
302
28.1
AT2G29680
Arabidopsis thaliana
4.6e-25
118.2
429
25.2
WBGene00000382
Caenorhabditis elegans
7.4e-23
110.9
232
32.8
tho352360
Thalassiosira oceanica
2.3e-16
89.4
306
25.5
YJL194W
Saccharomyces cerevisiae strain S288C
1.5e-15
86.7
375
20.8
ps00G105730
Pseudo-nitzschia multiseries
2.0e-15
86.3
302
28.1
CC00G128650
Cyclotella cryptica
1.1e-13
80.5
357
25.5
gene10234
Fragilariopsis cylindrus
1.1e-13
80.5
313
26.2
gsu16090
Galdieria sulphuraria
1.1e-13
80.5
222
27.0
CM05G00820
Cyanidioschyzon merolae
1.5e-12
76.6
297
24.9
fso65910
Fistulifera solaris
2.9e-11
72.4
271
23.6
Cre06.g292850
Chlamydomonas reinhardtii
3.2e-10
68.9
151
28.5
emh587490
Emiliania huxleyi
3.2e-10
68.9
406
21.9
emh305820
Emiliania huxleyi
4.2e-10
68.6
406
22.2
tho354400
Thalassiosira oceanica
5.5e-10
68.2
283
25.4
WBGene00001470
Caenorhabditis elegans
9.4e-10
67.4
51
49.0
Sro395_g133970
Seminavis robusta
4.7e-09
65.1
283
24.4
sya00G54350
Synedra acus
4.7e-09
65.1
295
24.1
ptri215900
Phaeodactylum tricornutum
1.8e-08
63.2
341
22.3
YJR119C
Saccharomyces cerevisiae strain S288C
1.8e-08
63.2
109
37.6
fso74190
Fistulifera solaris
2.3e-08
62.8
46
52.2
gene13404
Fragilariopsis cylindrus
5.1e-08
61.6
62
41.9
ENSG00000070047
Homo sapiens
5.1e-08
61.6
56
46.4
ENSG00000274780
Homo sapiens
5.1e-08
61.6
56
46.4
ENSG00000123636
Homo sapiens
1.1e-07
60.5
82
40.2
emh07290
Emiliania huxleyi
1.5e-07
60.1
54
44.4
tps06190
Thalassiosira pseudonana
1.5e-07
60.1
281
23.5
ENSG00000156650
Homo sapiens
2.0e-07
59.7
57
43.9
ENSG00000281813
Homo sapiens
2.0e-07
59.7
57
43.9
CC00G29930
Cyclotella cryptica
2.6e-07
59.3
52
48.1
gene9617
Fragilariopsis cylindrus
4.4e-07
58.5
248
24.2
fso198910
Fistulifera solaris
4.4e-07
58.5
75
36.0
ENSG00000083168
Homo sapiens
4.4e-07
58.5
57
42.1
Cre12.g514250
Chlamydomonas reinhardtii
5.7e-07
58.2
100
32.0
FBgn0037344
Drosophila melanogaster
7.4e-07
57.8
60
36.7
emh580690
Emiliania huxleyi
7.4e-07
57.8
47
46.8
ENSG00000111642
Homo sapiens
7.4e-07
57.8
77
35.1
sya00G181760
Synedra acus
7.4e-07
57.8
62
46.8
sya00G181790
Synedra acus
7.4e-07
57.8
62
46.8
sya00G269090
Synedra acus
7.4e-07
57.8
62
46.8
emh694290
Emiliania huxleyi
9.7e-07
57.4
47
46.8
ENSG00000198604
Homo sapiens
9.7e-07
57.4
49
49.0
FBgn0023395
Drosophila melanogaster
1.3e-06
57.0
61
39.3
ps00G106340
Pseudo-nitzschia multiseries
1.3e-06
57.0
44
50.0
ps00G132040
Pseudo-nitzschia multiseries
1.3e-06
57.0
68
41.2
AT3G01460
Arabidopsis thaliana
1.7e-06
56.6
101
28.7
emh683230
Emiliania huxleyi
1.7e-06
56.6
68
47.1
ENSG00000011332
Homo sapiens
1.7e-06
56.6
49
42.9
WBGene00000482
Caenorhabditis elegans
2.2e-06
56.2
77
35.1
CC00G169430
Cyclotella cryptica
2.2e-06
56.2
50
40.0
CC00G198170
Cyclotella cryptica
2.2e-06
56.2
50
40.0
FBgn0033015
Drosophila melanogaster
2.2e-06
56.2
49
46.9
FBgn0027620
Drosophila melanogaster
2.2e-06
56.2
53
47.2
tho206560
Thalassiosira oceanica
2.2e-06
56.2
48
39.6
CC00G160670
Cyclotella cryptica
2.8e-06
55.8
74
39.2
ENSG00000048649
Homo sapiens
3.7e-06
55.5
81
32.1
tho48380
Thalassiosira oceanica
3.7e-06
55.5
60
41.7
tps162520
Thalassiosira pseudonana
3.7e-06
55.5
332
25.0
AT4G39100
Arabidopsis thaliana
4.8e-06
55.1
87
27.6
Cre08.g380151
Chlamydomonas reinhardtii
4.8e-06
55.1
47
42.6
sya00G232390
Synedra acus
4.8e-06
55.1
62
45.2
tps130320
Thalassiosira pseudonana
4.8e-06
55.1
62
40.3
ENSG00000116254
Homo sapiens
6.3e-06
54.7
47
42.6
ENSG00000170004
Homo sapiens
6.3e-06
54.7
47
38.3
ENSG00000009954
Homo sapiens
6.3e-06
54.7
46
45.7
Ec-12_006400
Ectocarpus siliculosus
8.2e-06
54.3
56
33.9
gene10211
Fragilariopsis cylindrus
8.2e-06
54.3
44
50.0
ENSG00000171634
Homo sapiens
8.2e-06
54.3
50
40.0
Pp3c10_2280
Physcomitrella patens
8.2e-06
54.3
88
31.8
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (2 genes)
Thalassiosira pseudonana (4 genes)
Thalassiosira oceanica (6 genes)
Pseudo-nitzschia multiseries (3 genes)
Fistulifera solaris (5 genes)
Fragilariopsis cylindrus (5 genes)
Cyclotella cryptica (6 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (3 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (16 genes)
Drosophila melanogaster (6 genes)
Caenorhabditis elegans (4 genes)
Saccharomyces cerevisiae strain S288C (3 genes)
Schizosaccharomyces pombe (2 genes)
Arabidopsis thaliana (6 genes)
Cyanidioschyzon merolae (2 genes)
Chondrus crispus (2 genes)
Galdieria sulphuraria (2 genes)
Emiliania huxleyi (7 genes)
Paramecium tetraurelia (4 genes)
Seminavis robusta (2 genes)
Synedra acus (6 genes)
Physcomitrella patens (3 genes)
Chlamydomonas reinhardtii (4 genes)
Pseudo-nitzschia multistriata (0 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing