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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
AT4G09000
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
AT4G09000
Arabidopsis thaliana
6.8e-174
611.3
319
100.0
AT1G35160
Arabidopsis thaliana
8.2e-127
454.9
316
79.4
AT1G78300
Arabidopsis thaliana
1.7e-119
430.6
311
75.9
Pp3c24_7310
Physcomitrella patens
4.1e-110
399.4
239
85.8
Pp3c24_7780
Physcomitrella patens
5.3e-110
399.1
239
85.4
Pp3c23_10780
Physcomitrella patens
3.8e-108
392.9
239
83.7
Pp3c23_11080
Physcomitrella patens
5.0e-108
392.5
239
84.1
AT5G38480
Arabidopsis thaliana
6.5e-108
392.1
236
84.3
AT5G10450
Arabidopsis thaliana
1.3e-103
377.9
240
79.6
AT5G65430
Arabidopsis thaliana
1.4e-102
374.4
238
79.4
Cre12.g559250
Chlamydomonas reinhardtii
9.1e-102
371.7
235
81.3
Pp3c3_8510
Physcomitrella patens
1.0e-100
368.2
239
79.5
AT3G02520
Arabidopsis thaliana
1.9e-99
364.0
237
80.2
ENSG00000108953
Homo sapiens
3.1e-94
346.7
235
77.4
ENSG00000274474
Homo sapiens
3.1e-94
346.7
235
77.4
Pp3c12_18760
Physcomitrella patens
7.0e-94
345.5
235
75.3
Pp3c10_14250
Physcomitrella patens
7.0e-94
345.5
235
74.9
CM16G02410
Cyanidioschyzon merolae
2.7e-93
343.6
238
74.8
gsu62950
Galdieria sulphuraria
2.7e-93
343.6
239
73.6
Pp3c10_20300
Physcomitrella patens
3.5e-93
343.2
235
74.9
Pp3c4_20750
Physcomitrella patens
3.5e-93
343.2
239
74.1
gsu56600
Galdieria sulphuraria
4.5e-93
342.8
239
74.1
FBgn0020238
Drosophila melanogaster
1.3e-92
341.3
235
75.3
AT1G26480
Arabidopsis thaliana
5.0e-92
339.3
243
71.6
AT5G16050
Arabidopsis thaliana
5.0e-92
339.3
238
74.8
Pp3c3_8540
Physcomitrella patens
5.5e-91
335.9
235
74.5
YDR099W
Saccharomyces cerevisiae strain S288C
1.2e-90
334.7
238
74.4
YER177W
Saccharomyces cerevisiae strain S288C
2.8e-90
333.6
238
74.4
SPAC8E11.02c
Schizosaccharomyces pombe
3.6e-90
333.2
239
72.8
SPAC17A2.13c
Schizosaccharomyces pombe
1.0e-89
331.6
238
72.7
ccr101920
Chondrus crispus
6.8e-89
328.9
239
72.0
Ec-06_008490
Ectocarpus siliculosus
3.4e-88
326.6
235
71.9
AT2G42590
Arabidopsis thaliana
5.7e-88
325.9
239
70.3
AT1G34760
Arabidopsis thaliana
1.7e-87
324.3
235
72.8
AT1G22300
Arabidopsis thaliana
7.0e-86
318.9
234
69.2
Sro322_g117060
Seminavis robusta
1.2e-85
318.2
233
70.4
Sro1737_g294480
Seminavis robusta
3.5e-85
316.6
233
70.0
tps108580
Thalassiosira pseudonana
1.0e-84
315.1
233
69.1
ccr192240
Chondrus crispus
1.3e-84
314.7
239
69.9
gsu14370
Galdieria sulphuraria
1.3e-84
314.7
236
67.8
gene17754
Fragilariopsis cylindrus
2.3e-84
313.9
233
69.1
gene14505
Fragilariopsis cylindrus
2.3e-84
313.9
233
69.1
ps00G138090
Pseudo-nitzschia multiseries
3.8e-84
313.2
233
68.7
tho142220
Thalassiosira oceanica
6.6e-84
312.4
237
68.4
fso64420
Fistulifera solaris
8.6e-84
312.0
233
68.7
fso204590
Fistulifera solaris
8.6e-84
312.0
233
68.7
Naga_100026g40
Nannochloropsis gaditana
1.5e-83
311.2
234
68.4
ptri68930
Phaeodactylum tricornutum
3.3e-83
310.1
233
68.7
AA0012G00890
Aureococcus anophagefferens
1.4e-81
304.7
233
68.2
AA0114G00030
Aureococcus anophagefferens
3.4e-80
300.1
234
66.7
WBGene00001502
Caenorhabditis elegans
8.3e-79
295.4
236
64.8
Cre06.g257500
Chlamydomonas reinhardtii
1.4e-78
294.7
238
62.6
FBgn0004907
Drosophila melanogaster
1.3e-76
288.1
235
64.3
WBGene00003920
Caenorhabditis elegans
1.7e-76
287.7
237
65.0
ENSG00000164924
Homo sapiens
3.0e-76
287.0
243
63.0
tho231020
Thalassiosira oceanica
3.0e-76
287.0
199
71.4
ENSG00000166913
Homo sapiens
6.6e-76
285.8
235
64.3
ENSG00000134308
Homo sapiens
9.5e-75
282.0
233
63.5
ENSG00000170027
Homo sapiens
1.1e-73
278.5
237
60.3
ENSG00000128245
Homo sapiens
8.9e-73
275.4
237
60.3
Ec-09_004190
Ectocarpus siliculosus
1.5e-72
274.6
214
66.4
pte437900
Paramecium tetraurelia
2.6e-72
273.9
260
53.1
emh577110
Emiliania huxleyi
3.4e-72
273.5
232
63.4
emh227500
Emiliania huxleyi
3.4e-72
273.5
232
63.4
ENSG00000175793
Homo sapiens
3.4e-72
273.5
234
59.8
pte593080
Paramecium tetraurelia
2.2e-71
270.8
242
55.8
pte712520
Paramecium tetraurelia
2.2e-71
270.8
242
55.8
pte251710
Paramecium tetraurelia
8.3e-71
268.9
241
55.6
CC00G179990
Cyclotella cryptica
1.6e-69
264.6
233
61.8
Pp3c10_14160
Physcomitrella patens
1.0e-68
261.9
189
70.4
emh640060
Emiliania huxleyi
3.3e-67
256.9
237
62.9
pte762160
Paramecium tetraurelia
3.3e-59
230.3
234
53.0
pte382540
Paramecium tetraurelia
4.3e-59
229.9
195
57.9
pte442890
Paramecium tetraurelia
4.3e-59
229.9
234
52.6
pte687770
Paramecium tetraurelia
9.5e-59
228.8
234
52.6
pte253910
Paramecium tetraurelia
2.1e-58
227.6
234
53.0
AT1G78220
Arabidopsis thaliana
3.9e-52
206.8
233
46.8
emh533080
Emiliania huxleyi
3.6e-50
200.3
244
48.8
emh397860
Emiliania huxleyi
3.6e-50
200.3
244
48.8
pte69630
Paramecium tetraurelia
2.9e-47
190.7
235
44.7
pte44220
Paramecium tetraurelia
8.4e-47
189.1
238
43.7
pte478200
Paramecium tetraurelia
1.0e-44
182.2
236
42.8
AT1G22290
Arabidopsis thaliana
1.8e-33
144.8
208
43.8
pte353250
Paramecium tetraurelia
8.7e-28
125.9
91
64.8
tho499840
Thalassiosira oceanica
1.9e-19
98.2
51
92.2
pte353230
Paramecium tetraurelia
2.4e-17
91.3
96
51.0
ps00G138110
Pseudo-nitzschia multiseries
5.0e-15
83.6
79
55.7
WBGene00010919
Caenorhabditis elegans
6.3e-10
66.6
98
39.8
emh325340
Emiliania huxleyi
1.5e-08
62.0
46
76.1
AT2G10450
Arabidopsis thaliana
6.5e-07
56.6
35
74.3
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (1 genes)
Thalassiosira oceanica (3 genes)
Pseudo-nitzschia multiseries (2 genes)
Fistulifera solaris (2 genes)
Fragilariopsis cylindrus (2 genes)
Cyclotella cryptica (1 genes)
Aureococcus anophagefferens (2 genes)
Ectocarpus siliculosus (2 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (8 genes)
Drosophila melanogaster (2 genes)
Caenorhabditis elegans (3 genes)
Saccharomyces cerevisiae strain S288C (2 genes)
Schizosaccharomyces pombe (2 genes)
Arabidopsis thaliana (15 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (2 genes)
Galdieria sulphuraria (3 genes)
Emiliania huxleyi (6 genes)
Paramecium tetraurelia (14 genes)
Seminavis robusta (2 genes)
Synedra acus (0 genes)
Physcomitrella patens (11 genes)
Chlamydomonas reinhardtii (2 genes)
Pseudo-nitzschia multistriata (0 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing