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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
AT4G01810
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
AT4G01810
Arabidopsis thaliana
0.0e+00
1667.9
881
100.0
Pp3c24_9090
Physcomitrella patens
8.0e-265
914.8
810
55.9
Pp3c8_12300
Physcomitrella patens
1.8e-256
887.1
791
56.1
gene19883
Fragilariopsis cylindrus
9.1e-35
150.6
895
23.0
ptri90520
Phaeodactylum tricornutum
2.9e-33
145.6
893
23.0
ps00G02360
Pseudo-nitzschia multiseries
8.5e-33
144.1
850
21.9
ENSG00000100934
Homo sapiens
2.1e-31
139.4
694
22.6
ENSG00000101310
Homo sapiens
2.1e-31
139.4
698
22.3
SPBC776.04
Schizosaccharomyces pombe
2.7e-31
139.0
707
24.6
Sro810_g205820
Seminavis robusta
2.7e-31
139.0
586
24.7
PSNMU-V1.4_AUG-EV-PASAV3_0076880
Pseudo-nitzschia multistriata
8.0e-31
137.5
927
22.5
FBgn0262125
Drosophila melanogaster
3.0e-30
135.6
707
22.2
SPCC31H12.07
Schizosaccharomyces pombe
6.8e-30
134.4
692
23.7
AT2G21630
Arabidopsis thaliana
2.0e-29
132.9
690
23.9
pte739270
Paramecium tetraurelia
3.4e-29
132.1
718
20.6
pte770530
Paramecium tetraurelia
7.5e-29
131.0
683
20.8
sya00G197750
Synedra acus
1.7e-28
129.8
346
28.6
AA0001G05890
Aureococcus anophagefferens
8.3e-28
127.5
726
22.2
gsu83220
Galdieria sulphuraria
8.3e-28
127.5
770
21.8
gene14582
Fragilariopsis cylindrus
3.1e-27
125.6
779
21.4
YPR181C
Saccharomyces cerevisiae strain S288C
1.2e-26
123.6
738
22.2
fso149890
Fistulifera solaris
5.0e-25
118.2
577
23.6
ccr135140
Chondrus crispus
2.8e-23
112.5
648
22.5
Ec-10_002710
Ectocarpus siliculosus
4.7e-23
111.7
223
31.8
Ec-03_002540
Ectocarpus siliculosus
6.3e-20
101.3
428
23.6
fso155130
Fistulifera solaris
8.3e-20
100.9
366
25.7
sya00G173380
Synedra acus
3.5e-18
95.5
436
25.0
gene18276
Fragilariopsis cylindrus
2.9e-17
92.4
465
22.6
ptri218380
Phaeodactylum tricornutum
4.3e-16
88.6
443
24.4
Sro972_g226640
Seminavis robusta
9.5e-16
87.4
446
24.4
ps00G75540
Pseudo-nitzschia multiseries
1.8e-14
83.2
482
22.2
fso09280
Fistulifera solaris
1.2e-13
80.5
491
22.2
fso69950
Fistulifera solaris
1.5e-13
80.1
489
22.1
Naga_100156g14
Nannochloropsis gaditana
1.7e-12
76.6
249
26.5
Cre10.g447350
Chlamydomonas reinhardtii
2.2e-12
76.3
396
22.2
tho114220
Thalassiosira oceanica
2.3e-09
66.2
211
25.1
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (2 genes)
Thalassiosira pseudonana (0 genes)
Thalassiosira oceanica (1 genes)
Pseudo-nitzschia multiseries (2 genes)
Fistulifera solaris (4 genes)
Fragilariopsis cylindrus (3 genes)
Cyclotella cryptica (0 genes)
Aureococcus anophagefferens (1 genes)
Ectocarpus siliculosus (2 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (2 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (2 genes)
Arabidopsis thaliana (2 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (1 genes)
Galdieria sulphuraria (1 genes)
Emiliania huxleyi (0 genes)
Paramecium tetraurelia (2 genes)
Seminavis robusta (2 genes)
Synedra acus (2 genes)
Physcomitrella patens (2 genes)
Chlamydomonas reinhardtii (1 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing