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Interactive Phylogenetics Module
BLAST
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
AT1G70410
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
AT1G70410
Arabidopsis thaliana
1.2e-161
570.5
281
100.0
AT1G23730
Arabidopsis thaliana
7.2e-111
401.7
259
75.3
AT5G14740
Arabidopsis thaliana
2.3e-88
327.0
276
59.8
AT3G01500
Arabidopsis thaliana
2.6e-84
313.5
254
60.6
Pp3c1_19190
Physcomitrella patens
1.5e-52
208.0
259
44.0
AT4G33580
Arabidopsis thaliana
3.2e-50
200.3
228
45.2
Pp3c20_18640
Physcomitrella patens
2.1e-49
197.6
259
39.8
Pp3c2_15140
Physcomitrella patens
6.0e-49
196.1
228
44.3
Pp3c16_19250
Physcomitrella patens
1.9e-47
191.0
207
44.9
Pp3c24_9430
Physcomitrella patens
4.3e-47
189.9
206
45.1
AT1G58180
Arabidopsis thaliana
3.2e-42
173.7
216
39.8
Pp3c7_14450
Physcomitrella patens
1.3e-40
168.3
209
42.1
pte709950
Paramecium tetraurelia
6.3e-22
106.3
207
30.9
pte710960
Paramecium tetraurelia
4.1e-21
103.6
154
37.7
pte657760
Paramecium tetraurelia
1.3e-19
98.6
152
35.5
pte42220
Paramecium tetraurelia
5.0e-19
96.7
182
31.3
pte305580
Paramecium tetraurelia
1.2e-17
92.0
138
35.5
pte556640
Paramecium tetraurelia
2.1e-17
91.3
104
42.3
pte262850
Paramecium tetraurelia
8.0e-17
89.4
103
41.7
Ec-06_004120
Ectocarpus siliculosus
3.0e-16
87.4
194
30.4
SPBP8B7.05c
Schizosaccharomyces pombe
5.2e-16
86.7
198
32.3
Sro411_g137710
Seminavis robusta
6.3e-14
79.7
162
32.7
Cre09.g405750
Chlamydomonas reinhardtii
1.4e-13
78.6
118
34.7
YNL036W
Saccharomyces cerevisiae strain S288C
5.3e-13
76.6
194
28.9
Ec-22_001150
Ectocarpus siliculosus
2.7e-12
74.3
107
39.3
Cre13.g607350
Chlamydomonas reinhardtii
4.5e-12
73.6
121
35.5
ptri143790
Phaeodactylum tricornutum
2.9e-11
70.9
166
28.9
Sro1031_g233470
Seminavis robusta
3.8e-11
70.5
95
38.9
Sro241_g096440
Seminavis robusta
4.2e-10
67.0
178
31.5
Sro241_g096430
Seminavis robusta
7.2e-10
66.2
178
30.9
WBGene00000245
Caenorhabditis elegans
1.4e-08
62.0
137
29.2
FBgn0037646
Drosophila melanogaster
5.2e-08
60.1
116
30.2
ccr140520
Chondrus crispus
8.8e-08
59.3
179
28.5
Cre12.g485050
Chlamydomonas reinhardtii
2.6e-07
57.8
166
25.3
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (0 genes)
Thalassiosira oceanica (0 genes)
Pseudo-nitzschia multiseries (0 genes)
Fistulifera solaris (0 genes)
Fragilariopsis cylindrus (0 genes)
Cyclotella cryptica (0 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (2 genes)
Nannochloropsis gaditana (0 genes)
Homo sapiens (0 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (1 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (6 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (1 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (0 genes)
Paramecium tetraurelia (7 genes)
Seminavis robusta (4 genes)
Synedra acus (0 genes)
Physcomitrella patens (6 genes)
Chlamydomonas reinhardtii (3 genes)
Pseudo-nitzschia multistriata (0 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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Positions and Genes
No editing