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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
AT1G70260
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
AT1G70260
Arabidopsis thaliana
2.8e-211
735.7
376
100.0
AT1G60050
Arabidopsis thaliana
6.5e-123
442.2
365
59.5
AT3G28050
Arabidopsis thaliana
1.3e-51
205.3
352
35.5
AT5G40240
Arabidopsis thaliana
2.8e-49
197.6
347
33.7
AT5G40230
Arabidopsis thaliana
6.4e-46
186.4
355
31.8
AT4G15540
Arabidopsis thaliana
6.0e-44
179.9
357
31.1
AT4G30420
Arabidopsis thaliana
1.1e-37
159.1
347
29.7
AT3G28080
Arabidopsis thaliana
1.7e-35
151.8
375
29.6
AT5G40210
Arabidopsis thaliana
1.7e-35
151.8
326
31.0
AT3G28070
Arabidopsis thaliana
1.5e-34
148.7
372
29.8
AT3G28130
Arabidopsis thaliana
1.5e-34
148.7
346
30.3
AT3G56620
Arabidopsis thaliana
9.6e-34
146.0
353
29.5
AT1G75500
Arabidopsis thaliana
1.6e-33
145.2
348
29.3
AT2G40900
Arabidopsis thaliana
8.1e-33
142.9
344
28.5
AT5G07050
Arabidopsis thaliana
1.4e-32
142.1
340
27.9
AT1G09380
Arabidopsis thaliana
3.1e-32
141.0
336
27.4
AT1G21890
Arabidopsis thaliana
5.3e-32
140.2
334
28.7
AT3G53210
Arabidopsis thaliana
9.0e-32
139.4
362
28.7
AT4G08290
Arabidopsis thaliana
1.5e-31
138.7
366
26.8
AT3G28100
Arabidopsis thaliana
4.5e-31
137.1
368
28.3
AT4G01440
Arabidopsis thaliana
1.3e-30
135.6
330
24.8
AT4G08300
Arabidopsis thaliana
1.7e-30
135.2
345
25.2
AT5G64700
Arabidopsis thaliana
4.9e-30
133.7
340
24.7
AT1G01070
Arabidopsis thaliana
3.2e-29
131.0
366
26.8
AT2G39510
Arabidopsis thaliana
5.4e-29
130.2
339
26.3
AT1G44800
Arabidopsis thaliana
7.1e-29
129.8
333
25.8
AT4G01430
Arabidopsis thaliana
1.2e-28
129.0
362
24.6
AT2G37460
Arabidopsis thaliana
2.1e-28
128.3
341
26.7
AT1G11460
Arabidopsis thaliana
3.5e-28
127.5
329
27.4
AT3G18200
Arabidopsis thaliana
3.5e-28
127.5
358
27.7
AT1G11450
Arabidopsis thaliana
1.8e-27
125.2
292
29.5
AT3G30340
Arabidopsis thaliana
5.1e-27
123.6
335
26.0
AT1G43650
Arabidopsis thaliana
6.7e-27
123.2
340
26.5
Pp3c4_12350
Physcomitrella patens
8.7e-27
122.9
308
29.5
AT5G13670
Arabidopsis thaliana
1.1e-26
122.5
332
25.3
AT5G45370
Arabidopsis thaliana
1.5e-26
122.1
352
26.4
AT4G28040
Arabidopsis thaliana
3.3e-26
120.9
337
27.6
AT3G45870
Arabidopsis thaliana
1.3e-25
119.0
345
24.9
Pp3c4_21140
Physcomitrella patens
8.1e-25
116.3
353
27.2
AT1G68170
Arabidopsis thaliana
2.4e-24
114.8
341
25.8
Pp3c10_24460
Physcomitrella patens
5.3e-24
113.6
345
24.9
AT2G37450
Arabidopsis thaliana
9.0e-24
112.8
330
23.6
AT4G19185
Arabidopsis thaliana
2.6e-23
111.3
341
25.2
Pp3c12_19870
Physcomitrella patens
1.7e-22
108.6
342
25.1
Pp3c12_8230
Physcomitrella patens
3.8e-22
107.5
371
25.6
Pp3c5_11100
Physcomitrella patens
8.4e-22
106.3
331
25.1
Pp3c20_20860
Physcomitrella patens
9.3e-21
102.8
371
23.7
Pp3c23_13280
Physcomitrella patens
1.2e-20
102.4
343
23.0
AT1G25270
Arabidopsis thaliana
6.0e-20
100.1
339
24.8
AT5G47470
Arabidopsis thaliana
1.1e-18
95.9
352
23.6
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (0 genes)
Thalassiosira pseudonana (0 genes)
Thalassiosira oceanica (0 genes)
Pseudo-nitzschia multiseries (0 genes)
Fistulifera solaris (0 genes)
Fragilariopsis cylindrus (0 genes)
Cyclotella cryptica (0 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (0 genes)
Nannochloropsis gaditana (0 genes)
Homo sapiens (0 genes)
Drosophila melanogaster (0 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (0 genes)
Arabidopsis thaliana (42 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (0 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (0 genes)
Synedra acus (0 genes)
Physcomitrella patens (8 genes)
Chlamydomonas reinhardtii (0 genes)
Pseudo-nitzschia multistriata (0 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing