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Interactive Phylogenetics Module
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
AT1G20140
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
AT1G20140
Arabidopsis thaliana
9.2e-90
330.9
164
100.0
AT2G25700
Arabidopsis thaliana
3.2e-82
305.8
164
90.9
AT1G75950
Arabidopsis thaliana
6.4e-59
228.4
159
69.2
AT5G42190
Arabidopsis thaliana
2.1e-57
223.4
170
67.1
Pp3c20_7590
Physcomitrella patens
3.2e-50
199.5
164
63.4
Pp3c20_7680
Physcomitrella patens
3.2e-50
199.5
164
63.4
AT4G34210
Arabidopsis thaliana
7.1e-50
198.4
161
59.6
Pp3c2_5520
Physcomitrella patens
1.6e-49
197.2
160
63.8
Cre12.g501200
Chlamydomonas reinhardtii
3.5e-49
196.1
155
62.6
AT3G60010
Arabidopsis thaliana
1.0e-48
194.5
161
60.9
AT4G34470
Arabidopsis thaliana
1.7e-48
193.7
162
58.6
AT2G03170
Arabidopsis thaliana
2.1e-46
186.8
158
60.1
AT3G21850
Arabidopsis thaliana
2.1e-46
186.8
160
61.2
AT3G21860
Arabidopsis thaliana
4.0e-45
182.6
159
59.7
AT2G03160
Arabidopsis thaliana
1.9e-42
173.7
189
49.2
AT2G03190
Arabidopsis thaliana
2.7e-41
169.9
162
55.6
AT3G60020
Arabidopsis thaliana
4.6e-41
169.1
163
55.2
emh635360
Emiliania huxleyi
6.0e-41
168.7
154
56.5
AT3G25650
Arabidopsis thaliana
1.8e-40
167.2
162
54.3
gsu79490
Galdieria sulphuraria
2.5e-39
163.3
160
52.5
AT3G21830
Arabidopsis thaliana
2.4e-37
156.8
159
52.8
AT2G20160
Arabidopsis thaliana
3.1e-37
156.4
162
53.1
ENSG00000113558
Homo sapiens
1.0e-35
151.4
161
50.9
ccr168540
Chondrus crispus
1.7e-35
150.6
157
49.7
sya00G43790
Synedra acus
2.2e-35
150.2
160
48.8
Naga_100005g56
Nannochloropsis gaditana
4.9e-35
149.1
162
48.1
Pp3c1_36090
Physcomitrella patens
1.1e-34
147.9
160
48.8
Ec-07_004070
Ectocarpus siliculosus
3.2e-34
146.4
162
47.5
CM16G01190
Cyanidioschyzon merolae
5.5e-34
145.6
158
46.8
ptri215410
Phaeodactylum tricornutum
5.5e-34
145.6
166
47.6
tps71120
Thalassiosira pseudonana
2.1e-33
143.7
157
48.4
AA0002G06360
Aureococcus anophagefferens
1.0e-32
141.4
156
46.8
FBgn0025637
Drosophila melanogaster
1.8e-32
140.6
160
47.5
Sro661_g183260
Seminavis robusta
1.8e-32
140.6
157
45.9
SPBC409.05
Schizosaccharomyces pombe
6.7e-32
138.7
155
44.5
FBgn0026176
Drosophila melanogaster
1.1e-31
137.9
159
46.5
CC00G196720
Cyclotella cryptica
1.5e-31
137.5
157
45.2
WBGene00004807
Caenorhabditis elegans
1.9e-31
137.1
166
46.4
fso45850
Fistulifera solaris
1.9e-31
137.1
156
46.2
fso127120
Fistulifera solaris
1.9e-31
137.1
156
46.2
AT1G10230
Arabidopsis thaliana
2.5e-31
136.7
133
51.1
Sro1056_g236200
Seminavis robusta
1.3e-30
134.4
160
44.4
sya00G13530
Synedra acus
4.1e-29
129.4
145
46.9
WBGene00004809
Caenorhabditis elegans
9.0e-29
128.3
166
41.0
pte442100
Paramecium tetraurelia
1.5e-28
127.5
155
45.2
PSNMU-V1.4_AUG-EV-PASAV3_0070030
Pseudo-nitzschia multistriata
1.3e-27
124.4
174
41.4
WBGene00004808
Caenorhabditis elegans
1.7e-27
124.0
167
41.3
gene8333
Fragilariopsis cylindrus
2.2e-27
123.6
171
40.9
YDR328C
Saccharomyces cerevisiae strain S288C
6.5e-27
122.1
189
37.0
WBGene00004810
Caenorhabditis elegans
1.9e-26
120.6
159
42.8
ps00G17560
Pseudo-nitzschia multiseries
1.9e-26
120.6
120
50.0
sya00G163700
Synedra acus
2.5e-26
120.2
151
42.4
FBgn0034863
Drosophila melanogaster
3.5e-25
116.3
150
45.3
FBgn0026175
Drosophila melanogaster
1.0e-24
114.8
151
43.0
Pp3c23_19260
Physcomitrella patens
2.3e-24
113.6
113
55.8
AT3G21840
Arabidopsis thaliana
5.1e-24
112.5
159
44.7
gene16519
Fragilariopsis cylindrus
1.1e-23
111.3
117
47.9
FBgn0026174
Drosophila melanogaster
3.3e-23
109.8
151
41.1
ps00G86310
Pseudo-nitzschia multiseries
5.7e-23
109.0
120
43.3
sya00G259410
Synedra acus
1.6e-22
107.5
157
36.3
fso129490
Fistulifera solaris
3.7e-22
106.3
162
39.5
fso53850
Fistulifera solaris
8.2e-22
105.1
162
38.9
ptri227610
Phaeodactylum tricornutum
1.1e-21
104.8
159
37.7
WBGene00004811
Caenorhabditis elegans
5.3e-21
102.4
149
36.9
Ec-09_004320
Ectocarpus siliculosus
6.9e-21
102.1
165
34.5
WBGene00004814
Caenorhabditis elegans
1.2e-20
101.3
154
38.3
tps30630
Thalassiosira pseudonana
1.2e-20
101.3
165
37.6
AT3G53060
Arabidopsis thaliana
1.5e-20
100.9
91
58.2
PSNMU-V1.4_AUG-EV-PASAV3_0044610
Pseudo-nitzschia multistriata
1.5e-20
100.9
120
44.2
tho573320
Thalassiosira oceanica
2.0e-20
100.5
130
42.3
WBGene00004813
Caenorhabditis elegans
3.4e-20
99.8
151
37.1
WBGene00004816
Caenorhabditis elegans
4.5e-20
99.4
154
38.3
Sro696_g188900
Seminavis robusta
1.3e-19
97.8
147
39.5
tho234600
Thalassiosira oceanica
1.3e-19
97.8
122
43.4
WBGene00004815
Caenorhabditis elegans
6.5e-19
95.5
154
37.0
Sro696_g188910
Seminavis robusta
8.5e-19
95.1
164
35.4
sya00G84160
Synedra acus
1.1e-18
94.7
141
41.8
FBgn0031074
Drosophila melanogaster
5.5e-18
92.4
160
37.5
Sro1805_g298840
Seminavis robusta
7.2e-18
92.0
147
39.5
WBGene00004812
Caenorhabditis elegans
1.2e-17
91.3
117
42.7
tho121280
Thalassiosira oceanica
2.1e-17
90.5
162
37.0
tho285880
Thalassiosira oceanica
2.7e-17
90.1
66
63.6
tps109320
Thalassiosira pseudonana
7.9e-17
88.6
163
39.9
WBGene00004818
Caenorhabditis elegans
6.7e-16
85.5
160
33.8
WBGene00004819
Caenorhabditis elegans
8.8e-16
85.1
160
34.4
CC00G117540
Cyclotella cryptica
1.1e-15
84.7
174
32.8
sya00G84090
Synedra acus
2.0e-15
84.0
125
41.6
tps47390
Thalassiosira pseudonana
5.7e-15
82.4
177
31.1
WBGene00004820
Caenorhabditis elegans
7.4e-15
82.0
142
33.8
fso53420
Fistulifera solaris
8.2e-14
78.6
171
33.3
ps00G40280
Pseudo-nitzschia multiseries
8.2e-14
78.6
159
34.6
fso129040
Fistulifera solaris
4.1e-13
76.3
166
29.5
Sro119_g058220
Seminavis robusta
1.2e-12
74.7
177
29.9
sya00G84150
Synedra acus
1.2e-12
74.7
142
34.5
tho179600
Thalassiosira oceanica
2.6e-12
73.6
82
45.1
ccr128460
Chondrus crispus
1.0e-11
71.6
105
37.1
WBGene00004823
Caenorhabditis elegans
1.0e-11
71.6
148
34.5
fso53410
Fistulifera solaris
1.0e-11
71.6
165
28.5
AT3G61415
Arabidopsis thaliana
6.5e-11
68.9
154
31.2
WBGene00004821
Caenorhabditis elegans
6.5e-11
68.9
151
31.8
CC00G46080
Cyclotella cryptica
6.5e-11
68.9
74
43.2
WBGene00004822
Caenorhabditis elegans
8.5e-11
68.6
150
33.3
Pp3c14_18020
Physcomitrella patens
1.1e-10
68.2
58
58.6
CC00G186010
Cyclotella cryptica
1.4e-10
67.8
119
35.3
AT2G45950
Arabidopsis thaliana
1.9e-10
67.4
154
29.9
gene6053
Fragilariopsis cylindrus
5.5e-10
65.9
124
32.3
Pp3c5_3410
Physcomitrella patens
7.2e-10
65.5
74
44.6
PSNMU-V1.4_AUG-EV-PASAV3_0034870
Pseudo-nitzschia multistriata
1.2e-09
64.7
168
28.6
sya00G218460
Synedra acus
1.6e-09
64.3
174
26.4
Pp3c14_22070
Physcomitrella patens
1.4e-08
61.2
127
33.9
sya00G163740
Synedra acus
1.4e-08
61.2
59
45.8
WBGene00004826
Caenorhabditis elegans
2.3e-08
60.5
149
27.5
Pp3c9_25390
Physcomitrella patens
3.9e-08
59.7
106
35.8
fso129050
Fistulifera solaris
2.2e-06
53.9
144
29.9
pte687060
Paramecium tetraurelia
2.8e-06
53.5
150
28.0
sya00G163780
Synedra acus
4.8e-06
52.8
102
30.4
sya00G163660
Synedra acus
8.2e-06
52.0
77
37.7
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (2 genes)
Thalassiosira pseudonana (4 genes)
Thalassiosira oceanica (5 genes)
Pseudo-nitzschia multiseries (3 genes)
Fistulifera solaris (8 genes)
Fragilariopsis cylindrus (3 genes)
Cyclotella cryptica (4 genes)
Aureococcus anophagefferens (1 genes)
Ectocarpus siliculosus (2 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (1 genes)
Drosophila melanogaster (6 genes)
Caenorhabditis elegans (17 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (21 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (2 genes)
Galdieria sulphuraria (1 genes)
Emiliania huxleyi (1 genes)
Paramecium tetraurelia (2 genes)
Seminavis robusta (6 genes)
Synedra acus (11 genes)
Physcomitrella patens (9 genes)
Chlamydomonas reinhardtii (1 genes)
Pseudo-nitzschia multistriata (3 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
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