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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
AA0061G00050
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
AA0061G00050
Aureococcus anophagefferens
2.6e-278
958.7
481
100.0
tho264440
Thalassiosira oceanica
2.4e-122
440.7
486
48.6
Sro2137_g316040
Seminavis robusta
2.3e-120
434.1
476
46.8
Sro1702_g292230
Seminavis robusta
5.0e-120
433.0
491
45.8
PSNMU-V1.4_AUG-EV-PASAV3_0059290
Pseudo-nitzschia multistriata
3.6e-118
426.8
488
45.7
CC00G191150
Cyclotella cryptica
2.6e-116
420.6
482
45.0
gene9696
Fragilariopsis cylindrus
3.4e-116
420.2
488
46.1
tps121390
Thalassiosira pseudonana
3.7e-115
416.8
476
45.8
fso111840
Fistulifera solaris
3.5e-113
410.2
478
44.6
ps00G39000
Pseudo-nitzschia multiseries
4.6e-113
409.8
486
44.9
fso19260
Fistulifera solaris
1.9e-111
404.4
477
44.4
fso176450
Fistulifera solaris
4.3e-111
403.3
482
44.0
ptri132550
Phaeodactylum tricornutum
6.8e-109
396.0
451
46.6
CC00G205950
Cyclotella cryptica
2.0e-108
394.4
506
42.1
tps153490
Thalassiosira pseudonana
4.9e-107
389.8
472
44.5
Pp3c9_9110
Physcomitrella patens
2.0e-105
384.4
488
43.9
Pp3c7_20460
Physcomitrella patens
6.0e-105
382.9
479
42.8
ptri130030
Phaeodactylum tricornutum
5.0e-104
379.8
506
42.1
emh637700
Emiliania huxleyi
6.6e-104
379.4
476
43.5
emh229360
Emiliania huxleyi
6.6e-104
379.4
476
43.5
Cre10.g435300
Chlamydomonas reinhardtii
1.5e-103
378.3
496
44.2
sya00G45410
Synedra acus
1.5e-103
378.3
453
45.3
gene10762
Fragilariopsis cylindrus
1.6e-102
374.8
514
40.9
AT5G60160
Arabidopsis thaliana
2.1e-102
374.4
486
41.8
ccr142120
Chondrus crispus
2.2e-99
364.4
479
42.8
ps00G158270
Pseudo-nitzschia multiseries
2.9e-99
364.0
505
39.8
PSNMU-V1.4_AUG-EV-PASAV3_0055000
Pseudo-nitzschia multistriata
3.2e-98
360.5
506
39.3
AT5G04710
Arabidopsis thaliana
3.3e-95
350.5
478
40.4
CM07G00390
Cyanidioschyzon merolae
1.0e-88
328.9
492
41.9
ENSG00000123992
Homo sapiens
8.7e-88
325.9
479
38.8
YHR113W
Saccharomyces cerevisiae strain S288C
1.9e-87
324.7
482
40.0
WBGene00017163
Caenorhabditis elegans
2.5e-87
324.3
472
40.3
SPAC4F10.02
Schizosaccharomyces pombe
9.6e-87
322.4
483
37.3
fso177530
Fistulifera solaris
6.2e-86
319.7
407
42.3
pte510540
Paramecium tetraurelia
1.8e-85
318.2
472
38.6
AA0002G02370
Aureococcus anophagefferens
3.1e-85
317.4
463
40.2
pte237700
Paramecium tetraurelia
3.8e-83
310.5
472
37.5
Ec-16_002630
Ectocarpus siliculosus
4.2e-82
307.0
462
39.6
Naga_100236g6
Nannochloropsis gaditana
4.9e-75
283.5
426
40.6
Pp3c19_20030
Physcomitrella patens
7.9e-73
276.2
489
34.8
Pp3c22_2630
Physcomitrella patens
5.1e-72
273.5
491
34.2
YKL103C
Saccharomyces cerevisiae strain S288C
5.1e-56
220.3
485
33.4
sya00G111720
Synedra acus
6.3e-54
213.4
222
46.8
Pp3c18_7930
Physcomitrella patens
5.3e-53
210.3
456
31.1
CC00G07850
Cyclotella cryptica
6.7e-48
193.4
214
45.3
CC00G103510
Cyclotella cryptica
6.7e-48
193.4
214
45.3
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (2 genes)
Thalassiosira pseudonana (2 genes)
Thalassiosira oceanica (1 genes)
Pseudo-nitzschia multiseries (2 genes)
Fistulifera solaris (4 genes)
Fragilariopsis cylindrus (2 genes)
Cyclotella cryptica (4 genes)
Aureococcus anophagefferens (2 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (1 genes)
Drosophila melanogaster (0 genes)
Caenorhabditis elegans (1 genes)
Saccharomyces cerevisiae strain S288C (2 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (2 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (1 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (2 genes)
Paramecium tetraurelia (2 genes)
Seminavis robusta (2 genes)
Synedra acus (2 genes)
Physcomitrella patens (5 genes)
Chlamydomonas reinhardtii (1 genes)
Pseudo-nitzschia multistriata (2 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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Positions and Genes
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