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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
AA0052G00270
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
AA0052G00270
Aureococcus anophagefferens
9.9e-156
550.8
288
100.0
ps00G162480
Pseudo-nitzschia multiseries
1.6e-41
171.4
192
48.4
fso64930
Fistulifera solaris
6.9e-40
166.0
232
42.2
gene13329
Fragilariopsis cylindrus
4.4e-39
163.3
207
45.4
fso43920
Fistulifera solaris
1.7e-38
161.4
235
41.3
fso43940
Fistulifera solaris
6.4e-38
159.5
232
40.1
Sro750_g196940
Seminavis robusta
5.4e-37
156.4
185
45.4
sya00G53180
Synedra acus
7.1e-37
156.0
219
40.2
fso64910
Fistulifera solaris
7.8e-36
152.5
234
40.2
CC00G120840
Cyclotella cryptica
9.0e-32
139.0
176
40.9
CC00G161580
Cyclotella cryptica
9.0e-32
139.0
176
40.9
ps00G162490
Pseudo-nitzschia multiseries
2.9e-30
134.0
228
35.5
gene13848
Fragilariopsis cylindrus
1.5e-26
121.7
196
34.2
fso43880
Fistulifera solaris
3.7e-25
117.1
191
38.2
sya00G53200
Synedra acus
4.8e-25
116.7
137
39.4
fso194280
Fistulifera solaris
1.4e-24
115.2
186
36.0
ps00G170550
Pseudo-nitzschia multiseries
2.4e-24
114.4
148
41.9
fso64870
Fistulifera solaris
3.1e-24
114.0
187
37.4
fso107270
Fistulifera solaris
6.9e-24
112.8
149
39.6
ptri214910
Phaeodactylum tricornutum
2.6e-23
110.9
167
41.3
gene6343
Fragilariopsis cylindrus
3.4e-23
110.5
143
42.7
sya00G03010
Synedra acus
1.0e-22
109.0
150
40.0
sya00G205220
Synedra acus
1.7e-22
108.2
147
38.8
Sro604_g174130
Seminavis robusta
8.4e-22
105.9
142
38.0
Sro971_g226530
Seminavis robusta
1.1e-21
105.5
145
38.6
PSNMU-V1.4_AUG-EV-PASAV3_0045510
Pseudo-nitzschia multistriata
7.9e-20
99.4
158
40.5
tps02600
Thalassiosira pseudonana
6.7e-19
96.3
187
35.3
CC00G179620
Cyclotella cryptica
5.7e-18
93.2
148
38.5
tps107900
Thalassiosira pseudonana
2.8e-17
90.9
216
30.6
tho326060
Thalassiosira oceanica
9.0e-16
85.9
134
36.6
CC00G189230
Cyclotella cryptica
1.5e-10
68.6
131
34.4
Ec-07_001260
Ectocarpus siliculosus
3.1e-08
60.8
158
29.7
tps09900
Thalassiosira pseudonana
9.0e-08
59.3
163
28.8
pte561990
Paramecium tetraurelia
4.5e-07
57.0
145
27.6
Naga_100147g5
Nannochloropsis gaditana
7.7e-07
56.2
131
29.0
Cre01.g007200
Chlamydomonas reinhardtii
1.7e-06
55.1
163
29.4
Naga_100019g54
Nannochloropsis gaditana
2.9e-06
54.3
187
27.8
pte636610
Paramecium tetraurelia
6.5e-06
53.1
143
28.0
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (3 genes)
Thalassiosira oceanica (1 genes)
Pseudo-nitzschia multiseries (3 genes)
Fistulifera solaris (8 genes)
Fragilariopsis cylindrus (3 genes)
Cyclotella cryptica (4 genes)
Aureococcus anophagefferens (1 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (2 genes)
Homo sapiens (0 genes)
Drosophila melanogaster (0 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (0 genes)
Arabidopsis thaliana (0 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (0 genes)
Paramecium tetraurelia (2 genes)
Seminavis robusta (3 genes)
Synedra acus (4 genes)
Physcomitrella patens (0 genes)
Chlamydomonas reinhardtii (1 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing