Toggle navigation
Data
Overview
Download
Analyze
Gene families
Expansion_plot
Gene family finder
Synteny plot
Colinearity
Ks-graphs
Skyline plot
WGDotplot
Colinear region finder
Localization
Functional clusters
WGMapping
Other
Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
AA0028G00150
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
AA0028G00150
Aureococcus anophagefferens
0.0e+00
4444.8
2457
100.0
AA0005G02790
Aureococcus anophagefferens
1.2e-47
194.9
700
31.6
Ec-27_004180
Ectocarpus siliculosus
7.7e-31
139.0
190
40.0
emh650820
Emiliania huxleyi
2.0e-10
71.2
160
33.1
emh56040
Emiliania huxleyi
2.0e-10
71.2
160
33.1
Naga_100369g5
Nannochloropsis gaditana
1.3e-09
68.6
320
27.8
fso01860
Fistulifera solaris
2.8e-09
67.4
169
31.4
fso110980
Fistulifera solaris
4.8e-09
66.6
169
33.1
ccr144180
Chondrus crispus
8.2e-09
65.9
167
32.3
Pp3c21_6740
Physcomitrella patens
8.2e-09
65.9
159
34.0
AT5G65090
Arabidopsis thaliana
1.4e-08
65.1
305
26.2
Naga_100042g21
Nannochloropsis gaditana
1.8e-08
64.7
183
30.6
emh230600
Emiliania huxleyi
4.1e-08
63.5
172
36.6
tho09120
Thalassiosira oceanica
4.1e-08
63.5
169
29.6
Pp3c22_8620
Physcomitrella patens
7.0e-08
62.8
159
32.7
tps96360
Thalassiosira pseudonana
7.0e-08
62.8
183
29.5
Naga_100206g1
Nannochloropsis gaditana
7.7e-07
59.3
139
33.8
Pp3c19_21170
Physcomitrella patens
7.7e-07
59.3
163
32.5
AA0012G02080
Aureococcus anophagefferens
1.0e-06
58.9
155
34.8
ENSG00000165458
Homo sapiens
1.3e-06
58.5
280
25.0
Naga_100006g49
Nannochloropsis gaditana
1.3e-06
58.5
189
31.7
Pp3c1_32995
Physcomitrella patens
1.3e-06
58.5
167
34.1
Pp3c1_32990
Physcomitrella patens
1.3e-06
58.5
167
34.1
Cre07.g352400
Chlamydomonas reinhardtii
1.7e-06
58.2
212
34.0
Ec-16_002520
Ectocarpus siliculosus
1.7e-06
58.2
327
26.0
Sro1631_g287220
Seminavis robusta
1.7e-06
58.2
190
31.1
ps00G134480
Pseudo-nitzschia multiseries
2.9e-06
57.4
184
30.4
gene8165
Fragilariopsis cylindrus
3.8e-06
57.0
191
30.9
AT2G01900
Arabidopsis thaliana
8.5e-06
55.8
159
28.9
Naga_100001g215
Nannochloropsis gaditana
8.5e-06
55.8
284
25.7
Pp3c18_13030
Physcomitrella patens
8.5e-06
55.8
295
25.8
Pp3c2_9260
Physcomitrella patens
8.5e-06
55.8
176
33.5
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (0 genes)
Thalassiosira pseudonana (1 genes)
Thalassiosira oceanica (1 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (2 genes)
Fragilariopsis cylindrus (1 genes)
Cyclotella cryptica (0 genes)
Aureococcus anophagefferens (3 genes)
Ectocarpus siliculosus (2 genes)
Nannochloropsis gaditana (5 genes)
Homo sapiens (1 genes)
Drosophila melanogaster (0 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (0 genes)
Arabidopsis thaliana (2 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (1 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (3 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (1 genes)
Synedra acus (0 genes)
Physcomitrella patens (7 genes)
Chlamydomonas reinhardtii (1 genes)
Pseudo-nitzschia multistriata (0 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing