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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
AA0017G01510
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
AA0017G01510
Aureococcus anophagefferens
6.9e-38
157.5
82
100.0
Ec-05_002370
Ectocarpus siliculosus
7.5e-16
84.3
80
52.5
PSNMU-V1.4_AUG-EV-PASAV3_0023680
Pseudo-nitzschia multistriata
1.1e-14
80.5
80
46.2
ENSG00000122257
Homo sapiens
7.0e-14
77.8
80
48.8
CM17G00790
Cyanidioschyzon merolae
1.6e-13
76.6
80
51.2
Sro1007_g230440
Seminavis robusta
3.5e-13
75.5
80
46.2
Sro1007_g230390
Seminavis robusta
3.5e-13
75.5
80
46.2
FBgn0086129
Drosophila melanogaster
5.9e-13
74.7
75
45.3
ccr23220
Chondrus crispus
1.0e-12
73.9
79
46.8
Pp3c1_38750
Physcomitrella patens
1.7e-12
73.2
77
48.1
sya00G84920
Synedra acus
8.6e-12
70.9
80
45.0
tps143740
Thalassiosira pseudonana
4.2e-11
68.6
81
44.4
fso47310
Fistulifera solaris
2.1e-10
66.2
79
40.5
fso75940
Fistulifera solaris
3.6e-10
65.5
79
40.5
gsu99290
Galdieria sulphuraria
4.7e-10
65.1
70
45.7
SPBP8B7.15c
Schizosaccharomyces pombe
8.0e-10
64.3
81
43.2
ptri131770
Phaeodactylum tricornutum
1.8e-09
63.2
81
37.0
AT4G17410
Arabidopsis thaliana
3.0e-09
62.4
75
44.0
AT5G47430
Arabidopsis thaliana
5.2e-09
61.6
75
45.3
YKL059C
Saccharomyces cerevisiae strain S288C
5.2e-09
61.6
80
41.2
CC00G39250
Cyclotella cryptica
3.4e-08
58.9
82
40.2
Pp3c2_9100
Physcomitrella patens
1.4e-06
53.5
36
58.3
emh401960
Emiliania huxleyi
4.1e-06
52.0
79
38.0
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (1 genes)
Thalassiosira oceanica (0 genes)
Pseudo-nitzschia multiseries (0 genes)
Fistulifera solaris (2 genes)
Fragilariopsis cylindrus (0 genes)
Cyclotella cryptica (1 genes)
Aureococcus anophagefferens (1 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (0 genes)
Homo sapiens (1 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (2 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (1 genes)
Galdieria sulphuraria (1 genes)
Emiliania huxleyi (1 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (2 genes)
Synedra acus (1 genes)
Physcomitrella patens (2 genes)
Chlamydomonas reinhardtii (0 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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Genes only
Positions and Genes
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