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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
AA0011G00320
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
AA0011G00320
Aureococcus anophagefferens
3.2e-153
542.3
261
100.0
PSNMU-V1.4_AUG-EV-PASAV3_0026460
Pseudo-nitzschia multistriata
8.8e-95
348.2
271
63.1
ps00G145050
Pseudo-nitzschia multiseries
2.6e-94
346.7
270
64.4
gene4252
Fragilariopsis cylindrus
1.1e-89
331.3
269
63.6
emh732250
Emiliania huxleyi
1.4e-87
324.3
264
59.8
emh171390
Emiliania huxleyi
1.4e-87
324.3
264
59.8
tho75740
Thalassiosira oceanica
2.0e-86
320.5
282
60.3
CC00G149160
Cyclotella cryptica
3.0e-79
296.6
281
58.0
Naga_100052g18
Nannochloropsis gaditana
6.6e-66
252.3
293
46.8
Sro1308_g261501
Seminavis robusta
5.6e-57
222.6
156
67.3
Cre08.g376500
Chlamydomonas reinhardtii
1.3e-40
168.3
291
38.5
Pp3c21_8660
Physcomitrella patens
4.5e-38
159.8
184
44.0
Cre33.g758997
Chlamydomonas reinhardtii
9.0e-15
82.4
67
53.7
ENSG00000109674
Homo sapiens
5.3e-07
56.6
236
25.4
PSNMU-V1.4_AUG-EV-PASAV3_0030570
Pseudo-nitzschia multistriata
5.3e-07
56.6
112
35.7
ps00G53570
Pseudo-nitzschia multiseries
9.1e-07
55.8
111
33.3
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (0 genes)
Thalassiosira pseudonana (0 genes)
Thalassiosira oceanica (1 genes)
Pseudo-nitzschia multiseries (2 genes)
Fistulifera solaris (0 genes)
Fragilariopsis cylindrus (1 genes)
Cyclotella cryptica (1 genes)
Aureococcus anophagefferens (1 genes)
Ectocarpus siliculosus (0 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (1 genes)
Drosophila melanogaster (0 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (0 genes)
Arabidopsis thaliana (0 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (2 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (1 genes)
Synedra acus (0 genes)
Physcomitrella patens (1 genes)
Chlamydomonas reinhardtii (2 genes)
Pseudo-nitzschia multistriata (2 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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Positions and Genes
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