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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
AA0008G03300
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
AA0008G03300
Aureococcus anophagefferens
0.0e+00
4947.5
2651
100.0
Ec-08_000150
Ectocarpus siliculosus
2.6e-32
144.1
1386
21.9
AA0004G01450
Aureococcus anophagefferens
8.6e-28
129.0
197
37.6
AA0001G03690
Aureococcus anophagefferens
1.2e-26
125.2
192
38.0
AA0003G01700
Aureococcus anophagefferens
1.2e-18
98.6
252
30.6
Ec-05_005990
Ectocarpus siliculosus
7.8e-13
79.3
203
28.6
AA0018G00840
Aureococcus anophagefferens
3.3e-11
73.9
255
28.2
Ec-22_000940
Ectocarpus siliculosus
3.1e-09
67.4
711
23.1
Ec-20_001060
Ectocarpus siliculosus
7.5e-08
62.8
112
32.1
Ec-13_000400
Ectocarpus siliculosus
8.3e-07
59.3
283
23.3
Ec-11_002700
Ectocarpus siliculosus
1.4e-06
58.5
286
26.9
AA0028G00010
Aureococcus anophagefferens
2.4e-06
57.8
178
28.7
AA0031G00110
Aureococcus anophagefferens
2.4e-06
57.8
178
28.7
pte327110
Paramecium tetraurelia
4.1e-06
57.0
250
27.2
AA0018G00930
Aureococcus anophagefferens
7.0e-06
56.2
254
26.0
Sro63_g035630
Seminavis robusta
7.0e-06
56.2
207
29.0
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (0 genes)
Thalassiosira pseudonana (0 genes)
Thalassiosira oceanica (0 genes)
Pseudo-nitzschia multiseries (0 genes)
Fistulifera solaris (0 genes)
Fragilariopsis cylindrus (0 genes)
Cyclotella cryptica (0 genes)
Aureococcus anophagefferens (8 genes)
Ectocarpus siliculosus (6 genes)
Nannochloropsis gaditana (0 genes)
Homo sapiens (0 genes)
Drosophila melanogaster (0 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (0 genes)
Arabidopsis thaliana (0 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (0 genes)
Paramecium tetraurelia (1 genes)
Seminavis robusta (1 genes)
Synedra acus (0 genes)
Physcomitrella patens (0 genes)
Chlamydomonas reinhardtii (0 genes)
Pseudo-nitzschia multistriata (0 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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