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Interactive Phylogenetics Module
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
AA0007G02280
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
AA0007G02280
Aureococcus anophagefferens
0.0e+00
1325.5
661
100.0
Ec-02_002270
Ectocarpus siliculosus
1.5e-154
548.1
664
47.1
ccr176840
Chondrus crispus
9.3e-133
475.7
670
43.4
sya00G01830
Synedra acus
1.6e-132
474.9
670
44.6
ptri182910
Phaeodactylum tricornutum
4.6e-132
473.4
654
44.8
emh92980
Emiliania huxleyi
6.2e-121
436.4
667
41.4
tps58650
Thalassiosira pseudonana
1.1e-117
425.6
787
37.4
gene18203
Fragilariopsis cylindrus
7.9e-116
419.5
749
36.8
CC00G129530
Cyclotella cryptica
3.9e-115
417.2
790
36.3
fso93550
Fistulifera solaris
2.5e-114
414.5
811
35.6
fso158830
Fistulifera solaris
2.5e-114
414.5
811
36.1
ENSG00000110619
Homo sapiens
4.3e-114
413.7
762
37.1
ENSG00000278191
Homo sapiens
4.3e-114
413.7
762
37.1
PSNMU-V1.4_AUG-EV-PASAV3_0047050
Pseudo-nitzschia multistriata
3.7e-113
410.6
739
36.8
YNL247W
Saccharomyces cerevisiae strain S288C
1.5e-111
405.2
785
35.0
pte59360
Paramecium tetraurelia
2.2e-110
401.4
664
38.0
Pp3c9_7700
Physcomitrella patens
9.4e-109
396.0
764
35.6
Cre03.g169850
Chlamydomonas reinhardtii
3.6e-108
394.0
861
35.1
pte115710
Paramecium tetraurelia
3.6e-108
394.0
672
37.2
emh300850
Emiliania huxleyi
2.0e-106
388.3
731
36.9
Sro27_g018040
Seminavis robusta
2.5e-106
387.9
777
34.4
FBgn0027091
Drosophila melanogaster
3.3e-106
387.5
754
36.1
WBGene00000800
Caenorhabditis elegans
1.0e-102
375.9
757
35.9
SPAC29E6.06c
Schizosaccharomyces pombe
1.4e-101
372.1
767
34.2
pte300580
Paramecium tetraurelia
3.6e-100
367.5
655
35.6
gsu122140
Galdieria sulphuraria
6.1e-100
366.7
457
44.0
ps00G20820
Pseudo-nitzschia multiseries
3.0e-99
364.4
740
34.7
emh465540
Emiliania huxleyi
3.9e-91
337.4
724
35.5
CM08G00900
Cyanidioschyzon merolae
8.2e-89
329.7
665
34.7
Naga_100030g38
Nannochloropsis gaditana
2.4e-88
328.2
599
38.1
Ec-12_001440
Ectocarpus siliculosus
1.8e-83
312.0
559
36.9
Pp3c15_4020
Physcomitrella patens
8.3e-81
303.1
547
38.4
ccr78540
Chondrus crispus
3.1e-80
301.2
529
35.2
ENSG00000134905
Homo sapiens
5.3e-80
300.4
572
36.5
tho145040
Thalassiosira oceanica
2.0e-79
298.5
759
33.9
fso162670
Fistulifera solaris
4.5e-79
297.4
648
34.0
PSNMU-V1.4_AUG-EV-PASAV3_0122670
Pseudo-nitzschia multistriata
5.5e-77
290.4
702
32.3
AT2G31170
Arabidopsis thaliana
4.8e-73
277.3
466
37.3
Pp3c24_17740
Physcomitrella patens
5.4e-72
273.9
554
35.0
Cre01.g069472
Chlamydomonas reinhardtii
7.0e-72
273.5
397
40.1
FBgn0033900
Drosophila melanogaster
1.1e-69
266.2
565
33.6
Sro1515_g279050
Seminavis robusta
2.5e-69
265.0
571
34.2
AT5G38830
Arabidopsis thaliana
1.8e-67
258.8
407
37.3
fso117590
Fistulifera solaris
1.8e-67
258.8
614
33.4
gsu137350
Galdieria sulphuraria
2.3e-67
258.5
539
31.9
ptri95460
Phaeodactylum tricornutum
5.2e-67
257.3
688
31.0
AA0004G03330
Aureococcus anophagefferens
8.9e-67
256.5
287
49.8
sya00G25560
Synedra acus
8.9e-67
256.5
632
32.1
Naga_100013g2
Nannochloropsis gaditana
5.4e-64
247.3
427
37.7
CC00G143340
Cyclotella cryptica
2.7e-63
245.0
471
33.5
CC00G189060
Cyclotella cryptica
2.7e-63
245.0
471
33.5
gsu04030
Galdieria sulphuraria
3.5e-63
244.6
523
32.1
sya00G37710
Synedra acus
4.5e-63
244.2
436
34.9
AT3G56300
Arabidopsis thaliana
3.9e-62
241.1
390
37.4
Ec-10_004180
Ectocarpus siliculosus
4.3e-61
237.7
549
33.0
sya00G40270
Synedra acus
1.6e-60
235.7
344
40.7
CC00G141030
Cyclotella cryptica
4.7e-60
234.2
659
30.7
Sro91_g047640
Seminavis robusta
4.0e-59
231.1
430
35.6
ccr69820
Chondrus crispus
5.2e-59
230.7
443
34.1
gene6444
Fragilariopsis cylindrus
8.9e-59
229.9
299
44.1
PSNMU-V1.4_AUG-EV-PASAV3_0016440
Pseudo-nitzschia multistriata
8.9e-59
229.9
526
31.9
tps107090
Thalassiosira pseudonana
8.9e-59
229.9
361
38.8
tps42440
Thalassiosira pseudonana
4.4e-58
227.6
325
42.5
ps00G71330
Pseudo-nitzschia multiseries
5.8e-58
227.3
450
34.4
tho247180
Thalassiosira oceanica
2.9e-57
224.9
462
33.1
CM05G00370
Cyanidioschyzon merolae
8.3e-57
223.4
346
37.3
gene13676
Fragilariopsis cylindrus
5.4e-56
220.7
434
34.6
gsu118400
Galdieria sulphuraria
1.2e-55
219.5
406
35.0
ptri244100
Phaeodactylum tricornutum
1.2e-55
219.5
440
33.4
fso164820
Fistulifera solaris
5.0e-54
214.2
434
33.9
fso139070
Fistulifera solaris
2.5e-53
211.8
366
37.4
ps00G69190
Pseudo-nitzschia multiseries
2.1e-52
208.8
411
35.8
CM11G02090
Cyanidioschyzon merolae
1.7e-46
189.1
393
33.8
ccr141420
Chondrus crispus
7.3e-37
157.1
167
48.5
ccr42720
Chondrus crispus
1.5e-29
132.9
169
43.2
CC00G32130
Cyclotella cryptica
3.5e-23
111.7
277
28.9
ccr42740
Chondrus crispus
1.5e-18
96.3
87
52.9
tho122960
Thalassiosira oceanica
1.6e-15
86.3
62
56.5
Ec-10_000780
Ectocarpus siliculosus
1.6e-12
76.3
69
59.4
Naga_100070g19
Nannochloropsis gaditana
7.6e-10
67.4
89
43.8
AA0001G02600
Aureococcus anophagefferens
1.7e-09
66.2
67
59.7
ps00G23720
Pseudo-nitzschia multiseries
3.9e-06
55.1
92
42.4
PSNMU-V1.4_AUG-EV-PASAV3_0055320
Pseudo-nitzschia multistriata
6.7e-06
54.3
93
44.1
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (3 genes)
Thalassiosira pseudonana (3 genes)
Thalassiosira oceanica (3 genes)
Pseudo-nitzschia multiseries (4 genes)
Fistulifera solaris (6 genes)
Fragilariopsis cylindrus (3 genes)
Cyclotella cryptica (5 genes)
Aureococcus anophagefferens (3 genes)
Ectocarpus siliculosus (4 genes)
Nannochloropsis gaditana (3 genes)
Homo sapiens (3 genes)
Drosophila melanogaster (2 genes)
Caenorhabditis elegans (1 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (3 genes)
Cyanidioschyzon merolae (3 genes)
Chondrus crispus (6 genes)
Galdieria sulphuraria (4 genes)
Emiliania huxleyi (3 genes)
Paramecium tetraurelia (3 genes)
Seminavis robusta (3 genes)
Synedra acus (4 genes)
Physcomitrella patens (3 genes)
Chlamydomonas reinhardtii (2 genes)
Pseudo-nitzschia multistriata (4 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing