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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
AA0007G01330
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
AA0007G01330
Aureococcus anophagefferens
1.3e-66
253.4
113
100.0
ptri113740
Phaeodactylum tricornutum
1.3e-34
147.1
112
57.1
Pp3c15_5550
Physcomitrella patens
1.9e-33
143.3
112
53.6
ps00G02630
Pseudo-nitzschia multiseries
8.7e-31
134.4
113
55.8
Sro307_g113360
Seminavis robusta
3.3e-30
132.5
112
52.7
tps15900
Thalassiosira pseudonana
3.3e-30
132.5
117
54.7
gene18176
Fragilariopsis cylindrus
2.8e-29
129.4
113
55.8
emh662130
Emiliania huxleyi
3.6e-29
129.0
112
48.2
fso201640
Fistulifera solaris
3.6e-29
129.0
113
53.1
sya00G202980
Synedra acus
1.1e-28
127.5
112
51.8
fso03370
Fistulifera solaris
1.4e-28
127.1
113
52.2
Ec-12_008560
Ectocarpus siliculosus
1.8e-28
126.7
115
52.2
Cre02.g102400
Chlamydomonas reinhardtii
7.6e-27
121.3
110
46.4
ENSG00000161980
Homo sapiens
7.6e-27
121.3
111
51.4
WBGene00022309
Caenorhabditis elegans
3.2e-25
115.9
113
46.0
FBgn0061362
Drosophila melanogaster
2.1e-24
113.2
111
46.8
Naga_100041g7
Nannochloropsis gaditana
2.7e-24
112.8
111
47.7
gsu47280
Galdieria sulphuraria
1.4e-20
100.5
113
42.5
YDR045C
Saccharomyces cerevisiae strain S288C
2.5e-17
89.7
116
41.4
SPAC22A12.05
Schizosaccharomyces pombe
2.5e-17
89.7
119
42.0
AT4G07950
Arabidopsis thaliana
8.2e-13
74.7
118
37.3
AT1G01210
Arabidopsis thaliana
2.4e-12
73.2
118
35.6
CM13G03210
Cyanidioschyzon merolae
9.3e-09
61.2
94
35.1
pte610040
Paramecium tetraurelia
5.1e-07
55.5
110
32.7
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (1 genes)
Thalassiosira oceanica (0 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (2 genes)
Fragilariopsis cylindrus (1 genes)
Cyclotella cryptica (0 genes)
Aureococcus anophagefferens (1 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (1 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (1 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (2 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (1 genes)
Emiliania huxleyi (1 genes)
Paramecium tetraurelia (1 genes)
Seminavis robusta (1 genes)
Synedra acus (1 genes)
Physcomitrella patens (1 genes)
Chlamydomonas reinhardtii (1 genes)
Pseudo-nitzschia multistriata (0 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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Genes only
Positions and Genes
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