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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
AA0007G00280
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
AA0007G00280
Aureococcus anophagefferens
2.9e-244
845.5
430
100.0
AA0030G00400
Aureococcus anophagefferens
2.0e-67
258.1
276
51.4
sya00G204530
Synedra acus
1.6e-29
132.1
268
31.7
Naga_100013g19
Nannochloropsis gaditana
6.2e-29
130.2
300
31.7
sya00G74590
Synedra acus
9.9e-27
122.9
253
33.6
CC00G14480
Cyclotella cryptica
1.9e-25
118.6
311
30.5
gene20647
Fragilariopsis cylindrus
3.2e-25
117.9
270
31.5
PSNMU-V1.4_AUG-EV-PASAV3_0007920
Pseudo-nitzschia multistriata
1.6e-24
115.5
263
30.8
ptri12060
Phaeodactylum tricornutum
3.9e-23
110.9
284
30.3
CC00G108690
Cyclotella cryptica
8.7e-23
109.8
277
32.1
tps96260
Thalassiosira pseudonana
3.3e-22
107.8
187
34.2
Sro229_g093000
Seminavis robusta
4.3e-22
107.5
277
28.5
gene4574
Fragilariopsis cylindrus
4.0e-20
100.9
216
36.6
Sro348_g123250
Seminavis robusta
5.3e-20
100.5
255
30.6
ps00G168610
Pseudo-nitzschia multiseries
9.3e-17
89.7
171
31.0
gene3832
Fragilariopsis cylindrus
2.7e-16
88.2
210
35.7
Sro114_g056460
Seminavis robusta
3.0e-15
84.7
331
26.6
ENSG00000136247
Homo sapiens
9.0e-12
73.2
174
30.5
SPBC13G1.07
Schizosaccharomyces pombe
1.2e-11
72.8
248
27.8
pte317490
Paramecium tetraurelia
9.4e-09
63.2
173
26.0
Cre10.g446700
Chlamydomonas reinhardtii
5.1e-07
57.4
72
36.1
Ec-21_003620
Ectocarpus siliculosus
5.1e-07
57.4
109
36.7
ENSG00000186908
Homo sapiens
6.7e-07
57.0
70
42.9
pte418330
Paramecium tetraurelia
8.8e-07
56.6
117
32.5
emh570900
Emiliania huxleyi
1.1e-06
56.2
162
31.5
gsu115840
Galdieria sulphuraria
1.1e-06
56.2
81
35.8
tho205300
Thalassiosira oceanica
1.1e-06
56.2
50
44.0
WBGene00020694
Caenorhabditis elegans
1.5e-06
55.8
73
35.6
pte791590
Paramecium tetraurelia
1.5e-06
55.8
185
25.4
FBgn0260941
Drosophila melanogaster
2.5e-06
55.1
80
37.5
YDR126W
Saccharomyces cerevisiae strain S288C
2.5e-06
55.1
76
39.5
pte380760
Paramecium tetraurelia
3.3e-06
54.7
67
40.3
ENSG00000156599
Homo sapiens
5.7e-06
53.9
50
46.0
Pp3c14_14940
Physcomitrella patens
5.7e-06
53.9
68
38.2
Pp3c14_14250
Physcomitrella patens
5.7e-06
53.9
68
38.2
YDR264C
Saccharomyces cerevisiae strain S288C
5.7e-06
53.9
113
31.9
Pp3c17_5900
Physcomitrella patens
7.4e-06
53.5
68
38.2
pte617220
Paramecium tetraurelia
7.4e-06
53.5
185
25.9
ENSG00000175048
Homo sapiens
9.7e-06
53.1
188
29.3
pte63270
Paramecium tetraurelia
9.7e-06
53.1
173
25.4
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (1 genes)
Thalassiosira oceanica (1 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (0 genes)
Fragilariopsis cylindrus (3 genes)
Cyclotella cryptica (2 genes)
Aureococcus anophagefferens (2 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (4 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (1 genes)
Saccharomyces cerevisiae strain S288C (2 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (0 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (1 genes)
Emiliania huxleyi (1 genes)
Paramecium tetraurelia (6 genes)
Seminavis robusta (3 genes)
Synedra acus (2 genes)
Physcomitrella patens (3 genes)
Chlamydomonas reinhardtii (1 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing