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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
AA0006G04730
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
AA0006G04730
Aureococcus anophagefferens
0.0e+00
4743.3
2644
100.0
CC00G125420
Cyclotella cryptica
8.4e-68
261.9
457
37.4
Sro57_g033440
Seminavis robusta
1.3e-47
194.9
441
32.2
ptri15810
Phaeodactylum tricornutum
1.1e-43
181.8
446
32.1
tho98080
Thalassiosira oceanica
2.7e-42
177.2
341
34.9
tps39380
Thalassiosira pseudonana
4.8e-39
166.4
231
39.8
fso47240
Fistulifera solaris
4.4e-32
143.3
474
29.1
gene9252
Fragilariopsis cylindrus
1.1e-30
138.7
386
29.8
Sro151_g069220
Seminavis robusta
3.1e-30
137.1
475
29.3
gene5486
Fragilariopsis cylindrus
4.1e-30
136.7
410
28.0
fso126720
Fistulifera solaris
1.6e-26
124.8
488
26.6
gene16983
Fragilariopsis cylindrus
3.6e-26
123.6
488
27.5
fso45520
Fistulifera solaris
1.0e-25
122.1
488
26.8
ps00G25020
Pseudo-nitzschia multiseries
6.8e-25
119.4
351
31.1
ptri231130
Phaeodactylum tricornutum
9.8e-24
115.5
483
27.1
fso76000
Fistulifera solaris
1.8e-22
111.3
382
27.2
PSNMU-V1.4_AUG-EV-PASAV3_0081680
Pseudo-nitzschia multistriata
1.2e-21
108.6
419
28.6
ps00G48420
Pseudo-nitzschia multiseries
1.6e-21
108.2
491
26.3
sya00G64310
Synedra acus
2.7e-21
107.5
452
25.9
Ec-08_002240
Ectocarpus siliculosus
1.3e-20
105.1
491
27.7
tho351560
Thalassiosira oceanica
5.0e-20
103.2
500
26.8
tps23080
Thalassiosira pseudonana
1.5e-19
101.7
136
42.6
CC00G141900
Cyclotella cryptica
2.5e-19
100.9
136
41.9
AA0008G03700
Aureococcus anophagefferens
9.5e-19
99.0
180
38.9
tps196810
Thalassiosira pseudonana
9.5e-19
99.0
272
28.7
CC00G27290
Cyclotella cryptica
1.0e-17
95.5
518
25.9
ps00G13900
Pseudo-nitzschia multiseries
1.4e-17
95.1
267
30.3
sya00G269060
Synedra acus
1.4e-17
95.1
230
29.1
PSNMU-V1.4_AUG-EV-PASAV3_0075620
Pseudo-nitzschia multistriata
4.9e-15
86.7
164
32.3
tho175460
Thalassiosira oceanica
3.1e-14
84.0
169
35.5
AA0017G01270
Aureococcus anophagefferens
2.3e-09
67.8
340
28.8
Ec-28_001310
Ectocarpus siliculosus
2.0e-08
64.7
171
28.7
Cre06.g258200
Chlamydomonas reinhardtii
7.5e-08
62.8
126
38.1
AA0101G00040
Aureococcus anophagefferens
9.8e-08
62.4
82
45.1
AA0004G03530
Aureococcus anophagefferens
2.2e-07
61.2
58
51.7
SPAPB1A10.09
Schizosaccharomyces pombe
8.3e-07
59.3
358
23.7
Ec-24_001850
Ectocarpus siliculosus
1.4e-06
58.5
111
38.7
ENSG00000167548
Homo sapiens
9.2e-06
55.8
141
33.3
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (2 genes)
Thalassiosira pseudonana (3 genes)
Thalassiosira oceanica (3 genes)
Pseudo-nitzschia multiseries (3 genes)
Fistulifera solaris (4 genes)
Fragilariopsis cylindrus (3 genes)
Cyclotella cryptica (3 genes)
Aureococcus anophagefferens (5 genes)
Ectocarpus siliculosus (3 genes)
Nannochloropsis gaditana (0 genes)
Homo sapiens (1 genes)
Drosophila melanogaster (0 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (0 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (0 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (2 genes)
Synedra acus (2 genes)
Physcomitrella patens (0 genes)
Chlamydomonas reinhardtii (1 genes)
Pseudo-nitzschia multistriata (2 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing