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Interactive Phylogenetics Module
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
AA0006G04080
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
AA0006G04080
Aureococcus anophagefferens
1.1e-187
657.1
335
100.0
AA0002G02640
Aureococcus anophagefferens
1.9e-81
304.3
340
52.1
emh194100
Emiliania huxleyi
2.0e-75
284.3
309
51.5
Sro989_g228490
Seminavis robusta
2.2e-58
227.6
334
37.4
AT2G21730
Arabidopsis thaliana
2.9e-58
227.3
337
38.9
AT2G21890
Arabidopsis thaliana
1.6e-56
221.5
337
38.3
Naga_100017g10
Nannochloropsis gaditana
1.6e-56
221.5
337
38.0
AT4G37970
Arabidopsis thaliana
2.7e-56
220.7
340
37.6
Cre03.g207800
Chlamydomonas reinhardtii
2.7e-56
220.7
336
38.1
AT4G37990
Arabidopsis thaliana
1.8e-55
218.0
336
37.8
Cre03.g207550
Chlamydomonas reinhardtii
6.7e-55
216.1
338
38.8
fso176390
Fistulifera solaris
1.5e-54
214.9
345
38.3
fso111780
Fistulifera solaris
2.6e-54
214.2
345
38.3
AT4G37980
Arabidopsis thaliana
7.4e-54
212.6
336
38.4
CC00G131340
Cyclotella cryptica
1.3e-53
211.8
338
35.8
gsu24360
Galdieria sulphuraria
6.3e-53
209.5
333
35.1
AT4G39330
Arabidopsis thaliana
8.2e-53
209.1
336
36.0
sya00G251030
Synedra acus
7.0e-52
206.1
333
35.4
Pp3c1_39700
Physcomitrella patens
1.2e-51
205.3
336
35.1
AT1G72680
Arabidopsis thaliana
1.6e-51
204.9
336
35.7
CM17G03010
Cyanidioschyzon merolae
1.6e-51
204.9
342
38.0
AT4G34230
Arabidopsis thaliana
4.5e-51
203.4
338
36.7
gene11701
Fragilariopsis cylindrus
1.9e-49
198.0
337
33.5
Pp3c14_4770
Physcomitrella patens
7.2e-49
196.1
302
36.4
AT3G19450
Arabidopsis thaliana
1.2e-48
195.3
336
34.8
Pp3c2_10530
Physcomitrella patens
7.2e-41
169.5
338
31.7
Sro908_g218880
Seminavis robusta
1.2e-38
162.2
335
30.4
ccr174000
Chondrus crispus
5.7e-38
159.8
347
31.1
Cre09.g392134
Chlamydomonas reinhardtii
9.8e-38
159.1
331
31.4
ptri42350
Phaeodactylum tricornutum
2.4e-36
154.5
337
31.8
Cre14.g623650
Chlamydomonas reinhardtii
2.0e-35
151.4
327
31.2
pte44710
Paramecium tetraurelia
4.2e-33
143.7
317
30.0
YMR318C
Saccharomyces cerevisiae strain S288C
5.5e-33
143.3
323
31.0
pte406360
Paramecium tetraurelia
7.2e-33
142.9
320
29.7
pte591340
Paramecium tetraurelia
7.2e-33
142.9
317
30.6
Pp3s30_80
Physcomitrella patens
8.8e-31
136.0
324
29.0
YCR105W
Saccharomyces cerevisiae strain S288C
2.4e-28
127.9
315
28.6
SPCC13B11.01
Schizosaccharomyces pombe
2.4e-28
127.9
336
29.8
YMR303C
Saccharomyces cerevisiae strain S288C
3.1e-28
127.5
334
29.6
YBR145W
Saccharomyces cerevisiae strain S288C
5.4e-28
126.7
331
27.5
YOL086C
Saccharomyces cerevisiae strain S288C
5.4e-28
126.7
329
28.9
YMR083W
Saccharomyces cerevisiae strain S288C
1.6e-27
125.2
334
29.0
pte485230
Paramecium tetraurelia
1.7e-26
121.7
323
27.2
pte553340
Paramecium tetraurelia
2.9e-26
120.9
319
27.6
gsu43780
Galdieria sulphuraria
5.0e-26
120.2
323
26.9
gsu25190
Galdieria sulphuraria
4.7e-24
113.6
317
25.6
Naga_100049g35
Nannochloropsis gaditana
8.9e-23
109.4
316
28.8
WBGene00017060
Caenorhabditis elegans
2.0e-22
108.2
307
29.0
AA0003G05540
Aureococcus anophagefferens
5.7e-22
106.7
335
28.1
sya00G152490
Synedra acus
4.9e-21
103.6
342
26.9
WBGene00010791
Caenorhabditis elegans
1.4e-20
102.1
320
25.6
WBGene00010790
Caenorhabditis elegans
7.8e-19
96.3
331
27.8
AT5G63620
Arabidopsis thaliana
1.0e-15
85.9
271
27.3
Pp3c10_670
Physcomitrella patens
2.0e-14
81.6
234
29.9
AA0295G00010
Aureococcus anophagefferens
5.8e-14
80.1
212
30.2
Cre12.g543350
Chlamydomonas reinhardtii
3.7e-13
77.4
232
28.0
YDL168W
Saccharomyces cerevisiae strain S288C
1.9e-12
75.1
221
29.9
Cre12.g543400
Chlamydomonas reinhardtii
2.4e-12
74.7
232
27.6
Ec-18_002860
Ectocarpus siliculosus
1.2e-11
72.4
253
28.1
SPCC13B11.04c
Schizosaccharomyces pombe
1.6e-11
72.0
315
25.7
Pp3c13_17110
Physcomitrella patens
2.0e-11
71.6
234
27.4
YAL060W
Saccharomyces cerevisiae strain S288C
2.0e-11
71.6
335
24.5
Pp3c17_19890
Physcomitrella patens
2.7e-11
71.2
236
27.5
CM01G00090
Cyanidioschyzon merolae
6.0e-11
70.1
271
26.2
AT5G43940
Arabidopsis thaliana
1.0e-10
69.3
218
28.0
AT5G51970
Arabidopsis thaliana
1.0e-10
69.3
319
24.5
YAL061W
Saccharomyces cerevisiae strain S288C
6.6e-10
66.6
238
25.6
Pp3s58_327
Physcomitrella patens
1.1e-09
65.9
210
26.2
WBGene00011003
Caenorhabditis elegans
2.5e-09
64.7
264
25.8
SPBC1773.06c
Schizosaccharomyces pombe
7.3e-09
63.2
325
23.1
fso100720
Fistulifera solaris
1.2e-08
62.4
212
27.4
SPBC1773.05c
Schizosaccharomyces pombe
2.1e-08
61.6
213
29.1
fso16850
Fistulifera solaris
2.8e-08
61.2
210
27.1
ptri92490
Phaeodactylum tricornutum
2.8e-08
61.2
218
25.2
AT1G32780
Arabidopsis thaliana
1.4e-07
58.9
233
27.0
WBGene00011004
Caenorhabditis elegans
4.0e-07
57.4
209
25.4
ps00G122010
Pseudo-nitzschia multiseries
1.2e-06
55.8
87
34.5
gene18851
Fragilariopsis cylindrus
1.5e-06
55.5
76
35.5
PSNMU-V1.4_AUG-EV-PASAV3_0028300
Pseudo-nitzschia multistriata
7.5e-06
53.1
76
38.2
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (2 genes)
Thalassiosira pseudonana (0 genes)
Thalassiosira oceanica (0 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (4 genes)
Fragilariopsis cylindrus (2 genes)
Cyclotella cryptica (1 genes)
Aureococcus anophagefferens (4 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (2 genes)
Homo sapiens (0 genes)
Drosophila melanogaster (0 genes)
Caenorhabditis elegans (5 genes)
Saccharomyces cerevisiae strain S288C (9 genes)
Schizosaccharomyces pombe (4 genes)
Arabidopsis thaliana (13 genes)
Cyanidioschyzon merolae (2 genes)
Chondrus crispus (1 genes)
Galdieria sulphuraria (3 genes)
Emiliania huxleyi (1 genes)
Paramecium tetraurelia (5 genes)
Seminavis robusta (2 genes)
Synedra acus (2 genes)
Physcomitrella patens (8 genes)
Chlamydomonas reinhardtii (6 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing