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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
AA0006G00970
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
AA0006G00970
Aureococcus anophagefferens
0.0e+00
2208.3
1432
100.0
emh147460
Emiliania huxleyi
4.9e-30
135.6
234
35.0
emh86970
Emiliania huxleyi
4.6e-28
129.0
210
36.2
emh423040
Emiliania huxleyi
1.8e-27
127.1
210
35.7
Ec-08_003650
Ectocarpus siliculosus
3.0e-27
126.3
263
30.0
emh564480
Emiliania huxleyi
1.6e-25
120.6
168
39.3
emh413520
Emiliania huxleyi
6.7e-19
98.6
212
32.1
AA0003G05060
Aureococcus anophagefferens
2.5e-13
80.1
96
43.8
emh471450
Emiliania huxleyi
3.2e-13
79.7
88
42.0
AA0007G02720
Aureococcus anophagefferens
2.5e-10
70.1
100
40.0
AA0005G02170
Aureococcus anophagefferens
1.7e-09
67.4
147
35.4
emh497570
Emiliania huxleyi
2.8e-09
66.6
184
29.3
emh350260
Emiliania huxleyi
2.8e-09
66.6
184
29.3
Naga_100173g4
Nannochloropsis gaditana
3.7e-09
66.2
338
26.6
emh743240
Emiliania huxleyi
4.1e-08
62.8
292
29.1
Sro641_g180080
Seminavis robusta
7.7e-07
58.5
176
25.6
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (0 genes)
Thalassiosira pseudonana (0 genes)
Thalassiosira oceanica (0 genes)
Pseudo-nitzschia multiseries (0 genes)
Fistulifera solaris (0 genes)
Fragilariopsis cylindrus (0 genes)
Cyclotella cryptica (0 genes)
Aureococcus anophagefferens (4 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (0 genes)
Drosophila melanogaster (0 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (0 genes)
Arabidopsis thaliana (0 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (9 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (1 genes)
Synedra acus (0 genes)
Physcomitrella patens (0 genes)
Chlamydomonas reinhardtii (0 genes)
Pseudo-nitzschia multistriata (0 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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