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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
AA0005G05750
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
AA0005G05750
Aureococcus anophagefferens
2.3e-62
239.2
105
100.0
Naga_100314g1
Nannochloropsis gaditana
3.3e-48
192.2
102
82.4
fso04740
Fistulifera solaris
4.3e-48
191.8
102
83.3
fso103800
Fistulifera solaris
4.3e-48
191.8
102
83.3
ps00G26440
Pseudo-nitzschia multiseries
4.3e-48
191.8
102
83.3
ptri57900
Phaeodactylum tricornutum
4.3e-48
191.8
102
83.3
Sro1541_g280910
Seminavis robusta
4.3e-48
191.8
102
83.3
gene11270
Fragilariopsis cylindrus
9.5e-48
190.7
104
81.7
CC00G159360
Cyclotella cryptica
1.8e-46
186.4
99
82.8
tps158460
Thalassiosira pseudonana
1.8e-46
186.4
99
82.8
tho73140
Thalassiosira oceanica
4.9e-44
178.3
99
78.8
tho559080
Thalassiosira oceanica
4.9e-44
178.3
99
78.8
tho154500
Thalassiosira oceanica
2.3e-41
169.5
97
76.3
Cre12.g543450
Chlamydomonas reinhardtii
8.0e-39
161.0
105
70.5
emh496440
Emiliania huxleyi
5.8e-37
154.8
100
68.0
AA0008G03820
Aureococcus anophagefferens
1.6e-34
146.7
89
76.4
Pp3c11_19170
Physcomitrella patens
1.4e-22
107.1
95
49.5
Pp3c19_5710
Physcomitrella patens
1.4e-22
107.1
95
49.5
Pp3c7_7210
Physcomitrella patens
1.4e-22
107.1
95
49.5
gsu39320
Galdieria sulphuraria
1.8e-22
106.7
95
48.4
ENSG00000100387
Homo sapiens
1.8e-22
106.7
92
50.0
FBgn0025638
Drosophila melanogaster
1.2e-21
104.0
87
50.6
WBGene00004320
Caenorhabditis elegans
1.5e-21
103.6
92
48.9
ccr186760
Chondrus crispus
2.6e-21
102.8
94
48.9
SPAC23H4.18c
Schizosaccharomyces pombe
7.6e-21
101.3
91
48.4
YOL133W
Saccharomyces cerevisiae strain S288C
1.3e-20
100.5
95
45.3
FBgn0040291
Drosophila melanogaster
1.1e-19
97.4
94
47.9
AT3G42830
Arabidopsis thaliana
2.4e-19
96.3
92
46.7
pte310060
Paramecium tetraurelia
7.8e-18
91.3
87
44.8
pte679740
Paramecium tetraurelia
7.8e-18
91.3
87
44.8
CM17G03530
Cyanidioschyzon merolae
1.0e-17
90.9
92
42.4
AT5G20570
Arabidopsis thaliana
1.7e-17
90.1
116
38.8
ENSG00000114125
Homo sapiens
1.2e-13
77.4
88
37.5
WBGene00019993
Caenorhabditis elegans
1.5e-13
77.0
90
34.4
pte570080
Paramecium tetraurelia
3.4e-13
75.9
92
41.3
pte338460
Paramecium tetraurelia
2.2e-12
73.2
91
38.5
FBgn0044020
Drosophila melanogaster
2.9e-12
72.8
90
34.4
pte375310
Paramecium tetraurelia
2.9e-12
72.8
91
37.4
emh487270
Emiliania huxleyi
4.6e-10
65.5
91
31.9
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (1 genes)
Thalassiosira oceanica (3 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (2 genes)
Fragilariopsis cylindrus (1 genes)
Cyclotella cryptica (1 genes)
Aureococcus anophagefferens (2 genes)
Ectocarpus siliculosus (0 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (2 genes)
Drosophila melanogaster (3 genes)
Caenorhabditis elegans (2 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (2 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (1 genes)
Galdieria sulphuraria (1 genes)
Emiliania huxleyi (2 genes)
Paramecium tetraurelia (5 genes)
Seminavis robusta (1 genes)
Synedra acus (0 genes)
Physcomitrella patens (3 genes)
Chlamydomonas reinhardtii (1 genes)
Pseudo-nitzschia multistriata (0 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing