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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
AA0002G02370
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
AA0002G02370
Aureococcus anophagefferens
2.2e-280
965.7
495
100.0
Pp3c7_20460
Physcomitrella patens
2.8e-110
400.6
470
47.0
AT5G60160
Arabidopsis thaliana
1.1e-109
398.7
476
45.4
Pp3c9_9110
Physcomitrella patens
1.6e-108
394.8
478
46.0
Cre10.g435300
Chlamydomonas reinhardtii
6.6e-107
389.4
495
46.7
AT5G04710
Arabidopsis thaliana
3.7e-102
373.6
472
44.1
ENSG00000123992
Homo sapiens
1.8e-101
371.3
479
44.3
Ec-16_002630
Ectocarpus siliculosus
4.0e-96
353.6
465
44.1
Sro1702_g292230
Seminavis robusta
1.5e-95
351.7
480
44.8
YHR113W
Saccharomyces cerevisiae strain S288C
3.2e-93
344.0
485
42.5
tps121390
Thalassiosira pseudonana
1.6e-92
341.7
469
40.5
sya00G45410
Synedra acus
2.0e-92
341.3
456
42.3
ccr142120
Chondrus crispus
2.7e-92
340.9
451
42.1
emh637700
Emiliania huxleyi
6.0e-92
339.7
466
42.7
emh229360
Emiliania huxleyi
6.0e-92
339.7
466
42.7
SPAC4F10.02
Schizosaccharomyces pombe
1.0e-91
339.0
484
40.3
WBGene00017163
Caenorhabditis elegans
1.7e-91
338.2
475
40.6
tho264440
Thalassiosira oceanica
1.7e-91
338.2
479
40.5
tps153490
Thalassiosira pseudonana
5.0e-91
336.7
474
43.2
CC00G191150
Cyclotella cryptica
8.6e-91
335.9
482
39.8
gene9696
Fragilariopsis cylindrus
1.5e-90
335.1
486
39.7
PSNMU-V1.4_AUG-EV-PASAV3_0059290
Pseudo-nitzschia multistriata
4.3e-90
333.6
484
40.1
ps00G39000
Pseudo-nitzschia multiseries
8.1e-89
329.3
482
42.3
fso19260
Fistulifera solaris
1.1e-88
328.9
454
40.7
fso111840
Fistulifera solaris
1.1e-88
328.9
467
40.3
fso176450
Fistulifera solaris
1.1e-88
328.9
470
42.8
pte510540
Paramecium tetraurelia
2.6e-87
324.3
455
39.3
Sro2137_g316040
Seminavis robusta
2.6e-87
324.3
469
39.2
AA0061G00050
Aureococcus anophagefferens
2.2e-86
321.2
463
40.2
CC00G205950
Cyclotella cryptica
8.3e-86
319.3
502
38.0
Naga_100236g6
Nannochloropsis gaditana
4.1e-85
317.0
420
45.2
CM07G00390
Cyanidioschyzon merolae
5.4e-85
316.6
497
41.6
pte237700
Paramecium tetraurelia
1.2e-84
315.5
468
37.8
ptri130030
Phaeodactylum tricornutum
6.0e-84
313.2
500
36.8
gene10762
Fragilariopsis cylindrus
1.5e-82
308.5
503
38.2
PSNMU-V1.4_AUG-EV-PASAV3_0055000
Pseudo-nitzschia multistriata
1.6e-81
305.1
492
37.8
ps00G158270
Pseudo-nitzschia multiseries
2.8e-81
304.3
484
37.0
ptri132550
Phaeodactylum tricornutum
2.7e-76
287.7
422
40.8
Pp3c22_2630
Physcomitrella patens
5.2e-72
273.5
492
36.4
Pp3c19_20030
Physcomitrella patens
9.9e-71
269.2
480
36.2
fso177530
Fistulifera solaris
2.9e-70
267.7
393
39.4
Pp3c18_7930
Physcomitrella patens
4.2e-53
210.7
449
33.9
YKL103C
Saccharomyces cerevisiae strain S288C
1.5e-47
192.2
465
30.8
sya00G111720
Synedra acus
1.5e-39
165.6
208
42.3
CC00G07850
Cyclotella cryptica
9.7e-34
146.4
210
38.6
CC00G103510
Cyclotella cryptica
9.7e-34
146.4
210
38.6
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (2 genes)
Thalassiosira pseudonana (2 genes)
Thalassiosira oceanica (1 genes)
Pseudo-nitzschia multiseries (2 genes)
Fistulifera solaris (4 genes)
Fragilariopsis cylindrus (2 genes)
Cyclotella cryptica (4 genes)
Aureococcus anophagefferens (2 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (1 genes)
Drosophila melanogaster (0 genes)
Caenorhabditis elegans (1 genes)
Saccharomyces cerevisiae strain S288C (2 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (2 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (1 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (2 genes)
Paramecium tetraurelia (2 genes)
Seminavis robusta (2 genes)
Synedra acus (2 genes)
Physcomitrella patens (5 genes)
Chlamydomonas reinhardtii (1 genes)
Pseudo-nitzschia multistriata (2 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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Genes only
Positions and Genes
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