Expansion_plot
Gene family finder
Synteny plot
Ks-graphs
Skyline plot
WGDotplot
Functional clusters
WGMapping
BLAST
WorkbenchGene families associated with a Kegg term
All gene family content is shown and individual cells refer to the target genes (per species).
Kegg term
Description Kegg term
VCP, CDC48; transitional endoplasmic reticulum ATPase
#associated genes127
#associated gene families5
Click table-header(s) to enable sorting
| Gene family | #genes (in total) | #associated genes | type | species | aan | ath | ccr | cel | cme | cre | cycr | drm | emh | esi | fcy | fso | gsu | hom | nga | pmu | ppa | psm | pte | ptri | sac | scp | sro | sya | tho | tps |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| HOM02SEM000005 | 1134 | 121 | HOMFAM | 26 | 45 | 59 | 31 | 27 | 26 | 39 | 52 | 30 | 71 | 37 | 51 | 72 | 28 | 31 | 35 | 31 | 87 | 41 | 63 | 39 | 20 | 20 | 47 | 52 | 58 | 42 |
| HOM02SEM029908 | 3 | 3 | HOMFAM | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 3 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| HOM02SEM000003 | 1379 | 1 | HOMFAM | 5 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 4 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 4 | 0 | 1368 | 2 |
| HOM02SEM000925 | 51 | 1 | HOMFAM | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 51 | 0 | 0 |
| HOM02SEM003227 | 24 | 1 | HOMFAM | 20 | 1 | 1 | 1 | 0 | 1 | 1 | 1 | 0 | 1 | 1 | 2 | 2 | 1 | 0 | 1 | 1 | 1 | 1 | 0 | 1 | 0 | 0 | 1 | 3 | 1 | 1 |
#genes (in total)
This is the number of genes in the entire gene family.
#associated genesThis is the number of genes that are part of the gene family, and also have the specified Kegg term. Naturally, this number should be a subset of "#genes (in total)".