Gene: vmacro23163
General Information
Structural Information
- Species Vaccinium macrocarpon
- Gene Identifier vmacro23163
- Transcript Identifier vmacro23163-RA
- Gene Type Coding gene
- Location chr6_Vaccinium_macrocarpon_Stevens_v1 : 29564630-29565262 : negative
Gene Family Information
- ID HOM05D000124
- #Genes/#Species 2752/96
- Phylogenetic origin
- ID ORTHO05D000056
- #Genes/#Species 2677/95
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- id vmacro23163_Vaccinium_macrocarpon_Stevens_v1
Descriptions
- Description Similar to ERF1B: Ethylene-responsive transcription factor 1B (Arabidopsis thaliana OX=3702)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0010364 | ISO | PLAZA Integrative Orthology | regulation of ethylene biosynthetic process | Solyc02g077370.1 |
| GO:0010200 | ISO | PLAZA Integrative Orthology | response to chitin | AT4G18450 |
| GO:0031347 | ISO | PLAZA Integrative Orthology | regulation of defense response | Solyc09g066360.1 |
| GO:0010104 | ISO | PLAZA Integrative Orthology | regulation of ethylene-activated signaling pathway | Solyc09g066360.1 |
| GO:0045893 | ISO | PLAZA Integrative Orthology | positive regulation of transcription, DNA-templated | Solyc09g066360.1 |
| GO:0009733 | ISO | PLAZA Integrative Orthology | response to auxin | Solyc02g077370.1 |
| GO:0009867 | ISO | PLAZA Integrative Orthology | jasmonic acid mediated signaling pathway | AT3G23240 |
| GO:0006952 | ISO | PLAZA Integrative Orthology | defense response | AT3G23240 |
| GO:0009873 | IEA | InterPro | ethylene-activated signaling pathway | |
| GO:0006355 | IEA | InterPro | regulation of transcription, DNA-templated |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT3G23240 |
| GO:0003700 | IEA | InterPro | DNA-binding transcription factor activity | |
| GO:0043565 | ISO | PLAZA Integrative Orthology | sequence-specific DNA binding | Solyc09g066360.1 |
| GO:0000976 | ISO | PLAZA Integrative Orthology | transcription cis-regulatory region binding | AT4G18450 |
| GO:0003677 | IEA | InterPro | DNA binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005622 | ISO | PLAZA Integrative Orthology | intracellular anatomical structure | AT4G18450 |
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT3G23240 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 15.5.7.1 | RNA biosynthesis.transcriptional regulation.AP2/ERF transcription factor superfamily.transcription factor (ERF) |