Gene: vmacro21133

General Information

Structural Information

  • Species Vaccinium macrocarpon
  • Gene Identifier vmacro21133
  • Transcript Identifier vmacro21133-RA
  • Gene Type Coding gene
  • Location chr10_Vaccinium_macrocarpon_Stevens_v1 : 18951453-18961458 : positive

Gene Family Information

  • ID HOM05D000032
  • #Genes/#Species 5307/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id vmacro21133_Vaccinium_macrocarpon_Stevens_v1

Descriptions

  • Description Similar to Os01g0184500: DEAD-box ATP-dependent RNA helicase 39 (Oryza sativa subsp. japonica OX=39947)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016070
ISO
PLAZA Integrative OrthologyRNA metabolic process Solyc12g056740.2
GO:0110102
ISO
PLAZA Integrative Orthologyribulose bisphosphate carboxylase complex assembly AT4G09730
GO:1901259
ISO
PLAZA Integrative Orthologychloroplast rRNA processing AT4G09730

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
InterPronucleic acid binding
GO:0005524
IEA
InterProATP binding
GO:0016887
ISO
PLAZA Integrative OrthologyATP hydrolysis activity AT4G09730
GO:0003724
ISO
PLAZA Integrative OrthologyRNA helicase activity Solyc12g056740.2
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT4G09730
GO:0070180
ISO
PLAZA Integrative Orthologylarge ribosomal subunit rRNA binding AT4G09730

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT4G09730

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR014001 Helicase superfamily 1/2, ATP-binding domain
IPR001650 Helicase, C-terminal
IPR011545 DEAD/DEAH box helicase domain
Mapman id Description
35.1 not assigned.annotated