Gene: vmacro13217

General Information

Structural Information

  • Species Vaccinium macrocarpon
  • Gene Identifier vmacro13217
  • Transcript Identifier vmacro13217-RA
  • Gene Type Coding gene
  • Location chr7_Vaccinium_macrocarpon_Stevens_v1 : 879288-880600 : negative

Gene Family Information

  • ID HOM05D001840
  • #Genes/#Species 355/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id vmacro13217_Vaccinium_macrocarpon_Stevens_v1

Descriptions

  • Description Similar to Acyl-lipid (9-3)-desaturase (Borago officinalis OX=13363)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006629
IEA
InterProlipid metabolic process
GO:0042759
ISO
PLAZA Integrative Orthologylong-chain fatty acid biosynthetic process Pp3c15_5610
GO:0006636
ISO
PLAZA Integrative Orthologyunsaturated fatty acid biosynthetic process Pp3c15_5610
GO:0070417
ISO
PLAZA Integrative Orthologycellular response to cold AT3G61580
GO:0030148
ISO
PLAZA Integrative Orthologysphingolipid biosynthetic process AT3G61580

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016491
IEA
InterProoxidoreductase activity
GO:0052631
ISO
PLAZA Integrative Orthologysphingolipid delta-8 desaturase activity AT3G61580
GO:0016717
ISO
PLAZA Integrative Orthologyoxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water Pp3c15_5610

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016021
IEA
InterProintegral component of membrane
GO:0005783
ISO
PLAZA Integrative Orthologyendoplasmic reticulum AT3G61580

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR012171 Fatty acid desaturase
IPR036400 Cytochrome b5-like heme/steroid binding domain superfamily
IPR001199 Cytochrome b5-like heme/steroid binding domain
IPR005804 Fatty acid desaturase domain
Mapman id Description
5.4.10 Lipid metabolism.sphingolipid biosynthesis.delta-8 sphingolipid desaturase (SLD)