Gene: vmacro12638

General Information

Structural Information

  • Species Vaccinium macrocarpon
  • Gene Identifier vmacro12638
  • Transcript Identifier vmacro12638-RA
  • Gene Type Coding gene
  • Location chr11_Vaccinium_macrocarpon_Stevens_v1 : 21837239-21854667 : positive

Gene Family Information

  • ID HOM05D001073
  • #Genes/#Species 570/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id vmacro12638_Vaccinium_macrocarpon_Stevens_v1

Descriptions

  • Description Similar to PRR95: Two-component response regulator-like PRR95 (Oryza sativa subsp. japonica OX=39947)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000160
IEA
InterProphosphorelay signal transduction system
GO:0009266
ISO
PLAZA Integrative Orthologyresponse to temperature stimulus AT2G46790
GO:0045892
ISO
PLAZA Integrative Orthologynegative regulation of transcription, DNA-templated AT2G46790
GO:0010017
ISO
PLAZA Integrative Orthologyred or far-red light signaling pathway AT2G46790
GO:0006355
ISO
PLAZA Integrative Orthologyregulation of transcription, DNA-templated AT2G46790
GO:0007623
ISO
PLAZA Integrative Orthologycircadian rhythm AT2G46790

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
InterPronucleic acid binding
GO:0004523
IEA
InterProRNA-DNA hybrid ribonuclease activity
GO:0005515
IEA
InterProprotein binding
GO:0003677
ISO
PLAZA Integrative OrthologyDNA binding AT2G46790

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001789 Signal transduction response regulator, receiver domain
IPR011006 CheY-like superfamily
IPR002156 Ribonuclease H domain
IPR036397 Ribonuclease H superfamily
IPR012337 Ribonuclease H-like superfamily
IPR044730 Ribonuclease H-like domain, plant type
IPR010402 CCT domain
Mapman id Description
27.1.4 Multi-process regulation.circadian clock system.time-of-day-dependent expressed repressor (PRR)