Gene: vmacro10449
General Information
Structural Information
- Species Vaccinium macrocarpon
- Gene Identifier vmacro10449
- Transcript Identifier vmacro10449-RA
- Gene Type Coding gene
- Location chr8_Vaccinium_macrocarpon_Stevens_v1 : 9250252-9251811 : negative
Gene Family Information
- ID HOM05D001710
- #Genes/#Species 378/100
- Phylogenetic origin
- ID ORTHO05D001939
- #Genes/#Species 334/100
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- id vmacro10449_Vaccinium_macrocarpon_Stevens_v1
Descriptions
- Description Similar to pgdC: 6-phosphogluconate dehydrogenase, decarboxylating 1 (Spinacia oleracea OX=3562)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006098 | IEA | InterPro | pentose-phosphate shunt | |
| GO:0009409 | ISO | PLAZA Integrative Orthology | response to cold | Os11g0484500 |
| GO:0080173 | ISO | PLAZA Integrative Orthology | male-female gamete recognition during double fertilization forming a zygote and endosperm | AT3G02360 |
| GO:0009737 | ISO | PLAZA Integrative Orthology | response to abscisic acid | Os11g0484500 |
| GO:0009651 | ISO | PLAZA Integrative Orthology | response to salt stress | Os11g0484500 |
| GO:0009414 | ISO | PLAZA Integrative Orthology | response to water deprivation | Os11g0484500 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0050661 | IEA | InterPro | NADP binding | |
| GO:0004616 | IEA | InterPro | phosphogluconate dehydrogenase (decarboxylating) activity | |
| GO:0016491 | IEA | InterPro | oxidoreductase activity | |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT3G02360 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009570 | ISO | PLAZA Integrative Orthology | chloroplast stroma | AT3G02360 |
| GO:0005777 | ISO | PLAZA Integrative Orthology | peroxisome | AT3G02360 |
| GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT3G02360 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR008927 | 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily |
| IPR006115 | 6-phosphogluconate dehydrogenase, NADP-binding |
| IPR006183 | 6-phosphogluconate dehydrogenase |
| IPR006114 | 6-phosphogluconate dehydrogenase, C-terminal |
| IPR036291 | NAD(P)-binding domain superfamily |
| IPR006113 | 6-phosphogluconate dehydrogenase, decarboxylating |
| IPR013328 | 6-phosphogluconate dehydrogenase, domain 2 |
| Mapman id | Description |
|---|---|
| 3.9.1.3 | Carbohydrate metabolism.oxidative pentose phosphate pathway.oxidative phase.6-phosphogluconate dehydrogenase |