Gene: vmacro09604

General Information

Structural Information

  • Species Vaccinium macrocarpon
  • Gene Identifier vmacro09604
  • Transcript Identifier vmacro09604-RA
  • Gene Type Coding gene
  • Location chr6_Vaccinium_macrocarpon_Stevens_v1 : 928135-929353 : negative

Gene Family Information

  • ID HOM05D000008
  • #Genes/#Species 9932/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id vmacro09604_Vaccinium_macrocarpon_Stevens_v1

Descriptions

  • Description Similar to MYB80: Transcription factor MYB80 (Oryza sativa subsp. japonica OX=39947)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0052545
ISO
PLAZA Integrative Orthologycallose localization AT3G28470
GO:0048658
ISO
PLAZA Integrative Orthologyanther wall tapetum development AT5G56110
GO:0055046
ISO
PLAZA Integrative Orthologymicrogametogenesis AT3G28470
GO:0006355
ISO
PLAZA Integrative Orthologyregulation of transcription, DNA-templated AT5G56110
GO:0009555
ISO
PLAZA Integrative Orthologypollen development AT5G56110
GO:0010090
ISO
PLAZA Integrative Orthologytrichome morphogenesis AT5G56110

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003700
ISO
PLAZA Integrative OrthologyDNA-binding transcription factor activity AT5G56110
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G56110
GO:0043565
ISO
PLAZA Integrative Orthologysequence-specific DNA binding AT5G56110
GO:0003682
ISO
PLAZA Integrative Orthologychromatin binding AT5G56110
GO:0140110
ISO
PLAZA Integrative Orthologytranscription regulator activity AT5G56110

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT5G56110

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR009057 Homeobox-like domain superfamily
IPR001005 SANT/Myb domain
IPR017930 Myb domain
Mapman id Description
15.5.2.1 RNA biosynthesis.transcriptional regulation.MYB transcription factor superfamily.transcription factor (MYB)
21.8.1.2 Cell wall organisation.sporopollenin.biosynthesis.transcriptional key regulator (MS188)