Gene: AT5G56110
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT5G56110
- Transcript Identifier AT5G56110.1
- Gene Type Coding gene
- Location Chr5 : 22719191-22720664 : positive
Gene Family Information
- ID HOM05D000008
- #Genes/#Species 9932/97
- Phylogenetic origin
- ID ORTHO05D000005
- #Genes/#Species 8869/97
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid AT5G56110.1
- symbol MYB80
- uniprot Q9XHV0
Descriptions
- Description myb domain protein 103
- Computational description myb domain protein 103 (MYB103); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 74 (TAIR:AT4G05100.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009555 | IGI | Gene Ontology | pollen development | 1 |
| GO:0048658 | IEA | GOA Database | anther wall tapetum development | |
| GO:0048658 | IMP, IGI | Gene Ontology | anther wall tapetum development | 2 3 |
| GO:0006355 | IEA | GOA Database | regulation of transcription, DNA-templated | |
| GO:0006355 | TAS | Gene Ontology | regulation of transcription, DNA-templated | 4 |
| GO:0010090 | IMP | Gene Ontology | trichome morphogenesis | 5 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003677 | IEA | GOA Database | DNA binding | |
| GO:0005515 | IDA, IPI | Gene Ontology | protein binding | 1 6 |
| GO:0140110 | IDA | Gene Ontology | transcription regulator activity | 3 |
| GO:0003700 | IDA ISS | Gene Ontology | DNA-binding transcription factor activity | 3 7 |
| GO:0003682 | IDA | Gene Ontology | chromatin binding | 1 |
| GO:0043565 | IDA | Gene Ontology | sequence-specific DNA binding | 8 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | IEA | GOA Database | nucleus | |
| GO:0005634 | IDA ISM | Gene Ontology | nucleus | 2 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |