Gene: vmacro05182

General Information

Structural Information

  • Species Vaccinium macrocarpon
  • Gene Identifier vmacro05182
  • Transcript Identifier vmacro05182-RA
  • Gene Type Coding gene
  • Location chr12_Vaccinium_macrocarpon_Stevens_v1 : 14924816-14933725 : negative

Gene Family Information

  • ID HOM05D000246
  • #Genes/#Species 1713/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id vmacro05182_Vaccinium_macrocarpon_Stevens_v1

Descriptions

  • Description Similar to MED34: Mediator of RNA polymerase II transcription subunit 34 (Arabidopsis thaliana OX=3702)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006281
ISO
PLAZA Integrative OrthologyDNA repair AT1G31360
GO:0032508
ISO
PLAZA Integrative OrthologyDNA duplex unwinding AT1G31360
GO:0006310
ISO
PLAZA Integrative OrthologyDNA recombination AT1G31360

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
InterPronucleic acid binding
GO:0005524
IEA
InterProATP binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G31360
GO:0009378
ISO
PLAZA Integrative Orthologyfour-way junction helicase activity AT1G31360
GO:0043138
ISO
PLAZA Integrative Orthology3'-5' DNA helicase activity AT1G31360

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016592
ISO
PLAZA Integrative Orthologymediator complex AT1G31360

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR014001 Helicase superfamily 1/2, ATP-binding domain
IPR011545 DEAD/DEAH box helicase domain
Mapman id Description
35.1 not assigned.annotated