Gene: vmacro04590

General Information

Structural Information

  • Species Vaccinium macrocarpon
  • Gene Identifier vmacro04590
  • Transcript Identifier vmacro04590-RA
  • Gene Type Coding gene
  • Location chr12_Vaccinium_macrocarpon_Stevens_v1 : 4697166-4698518 : negative

Gene Family Information

  • ID HOM05D002992
  • #Genes/#Species 230/91
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id vmacro04590_Vaccinium_macrocarpon_Stevens_v1

Descriptions

  • Description Similar to PUB30: U-box domain-containing protein 30 (Arabidopsis thaliana OX=3702)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016567
IEA
InterProprotein ubiquitination
GO:0071472
ISO
PLAZA Integrative Orthologycellular response to salt stress AT3G49810
GO:1901001
ISO
PLAZA Integrative Orthologynegative regulation of response to salt stress AT3G49810
GO:1900457
ISO
PLAZA Integrative Orthologyregulation of brassinosteroid mediated signaling pathway Os03g0232600

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004842
IEA
InterProubiquitin-protein transferase activity
GO:0061630
ISO
PLAZA Integrative Orthologyubiquitin protein ligase activity AT3G49810
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT3G49810

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane Os03g0232600

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR016024 Armadillo-type fold
IPR013083 Zinc finger, RING/FYVE/PHD-type
IPR003613 U box domain
IPR011989 Armadillo-like helical
Mapman id Description
19.2.2.1.4.2.2 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.U-Box E3 ligase activities.group-III ligase