Gene: AT3G49810

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G49810
  • Transcript Identifier AT3G49810.1
  • Gene Type Coding gene
  • Location Chr3 : 18474936-18476282 : negative

Gene Family Information

  • ID HOM05D002992
  • #Genes/#Species 230/91
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G49810.1
  • Alias atPub30,U-box protein 30
  • uniprot Q058P4

Descriptions

  • Description ARM repeat superfamily protein
  • Computational description ARM repeat superfamily protein; FUNCTIONS IN: ubiquitin-protein ligase activity, binding; INVOLVED IN: protein ubiquitination; LOCATED IN: ubiquitin ligase complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT5G65920.1); Has 2157 Blast hits to 2086 proteins in 103 species: Archae - 0; Bacteria - 14; Metazoa - 79; Fungi - 29; Plants - 1932; Viruses - 3; Other Eukaryotes - 100 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016567
IEA
Gene Ontologyprotein ubiquitination
GO:0016567
IEA
InterProprotein ubiquitination
GO:0071472
IEP
Gene Ontologycellular response to salt stress1
GO:1901001
IMP
Gene Ontologynegative regulation of response to salt stress1
GO:1900457
ISO
PLAZA Integrative Orthologyregulation of brassinosteroid mediated signaling pathway Os03g0232600

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0061630
IDA
Gene Ontologyubiquitin protein ligase activity1
GO:0005515
IPI
Gene Ontologyprotein binding2
GO:0016740
IEA
GOA Databasetransferase activity
GO:0004842
IEA
GOA Databaseubiquitin-protein transferase activity
GO:0004842
IEA
InterProubiquitin-protein transferase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISM
Gene Ontologynucleus
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane Os03g0232600

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR016024 Armadillo-type fold
IPR003613 U box domain
IPR011989 Armadillo-like helical
IPR013083 Zinc finger, RING/FYVE/PHD-type
Mapman id Description
19.2.2.1.4.2.2 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.U-Box E3 ligase activities.group-III ligase