Gene: vmacro04192

General Information

Structural Information

  • Species Vaccinium macrocarpon
  • Gene Identifier vmacro04192
  • Transcript Identifier vmacro04192-RA
  • Gene Type Coding gene
  • Location chr9_Vaccinium_macrocarpon_Stevens_v1 : 34585515-34603022 : positive

Gene Family Information

  • ID HOM05D000104
  • #Genes/#Species 3097/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id vmacro04192_Vaccinium_macrocarpon_Stevens_v1

Descriptions

  • Description Similar to SYD: Chromatin structure-remodeling complex protein SYD (Arabidopsis thaliana OX=3702)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:1900150
ISO
PLAZA Integrative Orthologyregulation of defense response to fungus AT2G28290
GO:0009908
ISO
PLAZA Integrative Orthologyflower development AT2G28290
GO:0009611
ISO
PLAZA Integrative Orthologyresponse to wounding AT2G28290
GO:0010104
ISO
PLAZA Integrative Orthologyregulation of ethylene-activated signaling pathway AT2G28290
GO:2000022
ISO
PLAZA Integrative Orthologyregulation of jasmonic acid mediated signaling pathway AT2G28290
GO:0010199
ISO
PLAZA Integrative Orthologyorgan boundary specification between lateral organs and the meristem AT2G28290
GO:0040029
ISO
PLAZA Integrative Orthologyregulation of gene expression, epigenetic AT2G28290

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0042393
IEA
InterProhistone binding
GO:0005524
IEA
InterProATP binding
GO:0070615
IEA
InterPronucleosome-dependent ATPase activity
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT2G28290
GO:0003682
ISO
PLAZA Integrative Orthologychromatin binding AT2G28290

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT2G28290
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT2G28290

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR001650 Helicase, C-terminal
IPR029295 Snf2, ATP coupling domain
IPR038718 SNF2-like, N-terminal domain superfamily
IPR014001 Helicase superfamily 1/2, ATP-binding domain
IPR000330 SNF2, N-terminal
Mapman id Description
35.1 not assigned.annotated