Gene: arahy.Tifrunner.gnm1.ann1.IS7HAC
General Information
Structural Information
- Species Arachis hypogaea
- Gene Identifier arahy.Tifrunner.gnm1.ann1.IS7HAC
- Transcript Identifier arahy.Tifrunner.gnm1.ann1.IS7HAC.1
- Gene Type Coding gene
- Location arahy.Tifrunner.gnm1.Arahy.10 : 26463055-26467620 : positive
Gene Family Information
- ID HOM05D001133
- #Genes/#Species 544/79
- Phylogenetic origin
- ID ORTHO05D000941
- #Genes/#Species 544/80
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- id arahy.Tifrunner.gnm1.ann1.IS7HAC.v1.0
- pacid 42619265
Descriptions
- Description PF00016//PF00124//PF02788 - Ribulose bisphosphate carboxylase large chain, catalytic domain (RuBisCO_large) // Photosynthetic reaction centre protein (Photo_RC) // Ribulose bisphosphate carboxylase large chain, N-terminal domain (RuBisCO_large_N)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0046686 | ISO | PLAZA Integrative Orthology | response to cadmium ion | ATCG00490 |
| GO:0009737 | ISO | PLAZA Integrative Orthology | response to abscisic acid | ATCG00490 |
| GO:0009772 | IEA | InterPro | photosynthetic electron transport in photosystem II | |
| GO:0015977 | IEA | InterPro | carbon fixation | |
| GO:0019684 | IEA | InterPro | photosynthesis, light reaction |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003729 | ISO | PLAZA Integrative Orthology | mRNA binding | ATCG00490 |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | ATCG00490 |
| GO:0016984 | IEA | InterPro | ribulose-bisphosphate carboxylase activity | |
| GO:0000287 | IEA | InterPro | magnesium ion binding | |
| GO:0045156 | IEA | InterPro | electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0010287 | ISO | PLAZA Integrative Orthology | plastoglobule | ATCG00490 |
| GO:0005618 | ISO | PLAZA Integrative Orthology | cell wall | ATCG00490 |
| GO:0048046 | ISO | PLAZA Integrative Orthology | apoplast | ATCG00490 |
| GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | ATCG00490 |
| GO:0009535 | ISO | PLAZA Integrative Orthology | chloroplast thylakoid membrane | ATCG00490 |
| GO:0009579 | ISO | PLAZA Integrative Orthology | thylakoid | ATCG00490 |
| GO:0009941 | ISO | PLAZA Integrative Orthology | chloroplast envelope | ATCG00490 |
| GO:0022626 | ISO | PLAZA Integrative Orthology | cytosolic ribosome | ATCG00490 |
| GO:0009570 | ISO | PLAZA Integrative Orthology | chloroplast stroma | ATCG00490 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR000484 | Photosynthetic reaction centre, L/M |
| IPR036376 | Ribulose bisphosphate carboxylase, large subunit, C-terminal domain superfamily |
| IPR033966 | RuBisCO |
| IPR036854 | Photosystem II protein D1/D2 superfamily |
| IPR000685 | Ribulose bisphosphate carboxylase, large subunit, C-terminal |
| IPR017443 | Ribulose bisphosphate carboxylase, large subunit, ferrodoxin-like N-terminal |
| IPR036422 | RuBisCO large subunit, N-terminal domain superfamily |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |