Gene: arahy.Tifrunner.gnm1.ann1.B86ER2
General Information
Structural Information
- Species Arachis hypogaea
- Gene Identifier arahy.Tifrunner.gnm1.ann1.B86ER2
- Transcript Identifier arahy.Tifrunner.gnm1.ann1.B86ER2.1
- Gene Type Coding gene
- Location arahy.Tifrunner.gnm1.Arahy.15 : 149636204-149640650 : negative
Gene Family Information
- ID HOM05D006539
- #Genes/#Species 122/90
- Phylogenetic origin
- ID ORTHO05D009236
- #Genes/#Species 106/81
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- id arahy.Tifrunner.gnm1.ann1.B86ER2.v1.0
- pacid 42634446
Descriptions
- Description PF00588//PF01535//PF13041 - SpoU rRNA Methylase family (SpoU_methylase) // PPR repeat (PPR) // PPR repeat family (PPR_2)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006396 | IEA | InterPro | RNA processing | |
| GO:0030488 | IEA | InterPro | tRNA methylation |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003723 | IEA | InterPro | RNA binding | |
| GO:0008173 | IEA | InterPro | RNA methyltransferase activity | |
| GO:0005515 | IEA | InterPro | protein binding | |
| GO:0008168 | IEA | InterPro | methyltransferase activity | |
| GO:0003729 | ISO | PLAZA Integrative Orthology | mRNA binding | AT3G29230 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR002885 | Pentatricopeptide repeat |
| IPR001537 | tRNA/rRNA methyltransferase, SpoU type |
| IPR029028 | Alpha/beta knot methyltransferases |
| IPR011990 | Tetratricopeptide-like helical domain superfamily |
| IPR029026 | tRNA (guanine-N1-)-methyltransferase, N-terminal |
| IPR033671 | tRNA (guanosine(18)-2'-O)-methyltransferase |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |