Gene: Zm00001eb270470

General Information

Structural Information

  • Species Zea mays
  • Gene Identifier Zm00001eb270470
  • Transcript Identifier Zm00001eb270470_T001
  • Gene Type Coding gene
  • Location 6 : 81028663-81030409 : negative

Gene Family Information

  • ID HOM05D002811
  • #Genes/#Species 246/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Zm00001eb270470_T001
  • pid Zm00001eb270470_P001
  • uniprot A0A1Q1AUG7
  • uniprot A0A1D6LKY5
  • uniprot B2LXS7
  • uniprot A0A1D6LKY3
  • uniprot A0A3L6EAT7
  • uniprot A0A1D6LKY1
  • uniprot C0P415
  • uniprot C0HIZ1
  • entrez 100170235
  • refseq NP_001123589.1
  • refseq NM_001130117.1
  • V4_identifier Zm00001d036148

Descriptions

  • Description Zm00001e029993
  • Description whirly1
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0050832
ISO
PLAZA Integrative Orthologydefense response to fungus PGSC0003DMG400017627
GO:0032211
ISO
PLAZA Integrative Orthologynegative regulation of telomere maintenance via telomerase AT1G14410
GO:0045893
ISO
PLAZA Integrative Orthologypositive regulation of transcription, DNA-templated PGSC0003DMG400017627
GO:0006952
IEA
GOA Databasedefense response
GO:0006952
IEA
InterProdefense response
GO:0006355
IEA
GOA Databaseregulation of transcription, DNA-templated
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:0045910
IMP
GOA Databasenegative regulation of DNA recombination
GO:0006974
IEA
GOA Databasecellular response to DNA damage stimulus
GO:0006281
IEA
GOA DatabaseDNA repair

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0043565
ISO
PLAZA Integrative Orthologysequence-specific DNA binding PGSC0003DMG400017627
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT2G02740
GO:0042162
ISO
PLAZA Integrative Orthologytelomeric DNA binding AT1G14410
GO:0003700
ISO
PLAZA Integrative OrthologyDNA-binding transcription factor activity PGSC0003DMG400017627
GO:0003677
IDA
IEA
GOA DatabaseDNA binding
GO:0003677
IEA
InterProDNA binding
GO:0003697
IEA
GOA Databasesingle-stranded DNA binding
GO:0003697
IEA
InterProsingle-stranded DNA binding
GO:0003723
IDA
IEA
GOA DatabaseRNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009570
IDA
IEA
GOA Databasechloroplast stroma
GO:0042644
ISO
PLAZA Integrative Orthologychloroplast nucleoid AT2G02740
GO:0009508
ISO
PLAZA Integrative Orthologyplastid chromosome AT2G02740
GO:0009507
IEA
GOA Databasechloroplast
GO:0009536
IEA
GOA Databaseplastid
GO:0005634
IEA
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR013742 Whirly transcription factor
IPR009044 ssDNA-binding transcriptional regulator
Mapman id Description
13.5.7.1 Cell cycle organisation.organellar DNA replication.DNA recombination.recombination mediator (Whirly)