Gene: Zm00001eb242260

General Information

Structural Information

  • Species Zea mays
  • Gene Identifier Zm00001eb242260
  • Transcript Identifier Zm00001eb242260_T001
  • Gene Type Coding gene
  • Location 5 : 170326649-170331668 : negative

Gene Family Information

  • ID HOM05D002313
  • #Genes/#Species 293/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Zm00001eb242260_T001
  • pid Zm00001eb242260_P001
  • uniprot A0A1D6H9H2
  • uniprot A0A096S9C5
  • uniprot A0A1D6H9H0
  • uniprot A0A1D6H9H6
  • uniprot A0A1D6H9G6
  • uniprot A0A1D6H9F6
  • V4_identifier Zm00001d016640

Descriptions

  • Description Zm00001e014670
  • Description TUDOR-SN protein 1
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009686
ISO
PLAZA Integrative Orthologygibberellin biosynthetic process AT5G61780
GO:0034605
ISO
PLAZA Integrative Orthologycellular response to heat AT5G07350
GO:0009845
ISO
PLAZA Integrative Orthologyseed germination AT5G61780
GO:0009306
ISO
PLAZA Integrative Orthologyprotein secretion AT5G07350
GO:0006402
ISO
PLAZA Integrative OrthologymRNA catabolic process AT5G07350
GO:0006397
ISO
PLAZA Integrative OrthologymRNA processing AT5G07350
GO:0046686
ISO
PLAZA Integrative Orthologyresponse to cadmium ion AT5G07350
GO:0009651
ISO
PLAZA Integrative Orthologyresponse to salt stress AT5G07350
GO:0010372
ISO
PLAZA Integrative Orthologypositive regulation of gibberellin biosynthetic process AT5G07350
GO:0031047
IEA
GOA Databasegene silencing by RNA
GO:0031047
IEA
InterProgene silencing by RNA
GO:0090305
IEA
GOA Databasenucleic acid phosphodiester bond hydrolysis

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT5G07350
GO:0003723
ISO
PLAZA Integrative OrthologyRNA binding AT5G07350
GO:0004518
IEA
GOA Databasenuclease activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT5G07350
GO:0005618
ISO
PLAZA Integrative Orthologycell wall AT5G07350
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma AT5G61780
GO:0005635
ISO
PLAZA Integrative Orthologynuclear envelope AT5G07350
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT5G07350
GO:0016442
IEA
GOA DatabaseRISC complex
GO:0016442
IEA
InterProRISC complex
GO:0005783
ISO
PLAZA Integrative Orthologyendoplasmic reticulum AT5G07350
GO:0000932
ISO
PLAZA Integrative OrthologyP-body AT5G07350
GO:0010494
ISO
PLAZA Integrative Orthologycytoplasmic stress granule AT5G07350
GO:0005737
IEA
GOA Databasecytoplasm

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR002999 Tudor domain
IPR035437 SNase-like, OB-fold superfamily
IPR016071 Staphylococcal nuclease (SNase-like), OB-fold
IPR016685 RNA-induced silencing complex, nuclease component Tudor-SN
Mapman id Description
16.8.5 RNA processing.mRNA sequestration.ribonuclease (TSN)