Gene: Zm00001eb238400

General Information

Structural Information

  • Species Zea mays
  • Gene Identifier Zm00001eb238400
  • Transcript Identifier Zm00001eb238400_T001
  • Gene Type Coding gene
  • Location 5 : 145590174-145590632 : positive

Gene Family Information

  • ID HOM05D000157
  • #Genes/#Species 2371/94
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Zm00001eb238400_T001
  • pid Zm00001eb238400_P001
  • uniprot A0A3L6EMP8
  • uniprot A0A1D6H5L4
  • uniprot A0A3L6GBT1
  • uniprot B6SIM4
  • entrez 100280560
  • refseq NM_001153479.1
  • refseq NP_001146951.1
  • V4_identifier Zm00001d016137

Descriptions

  • Description Zm00001e014302
  • Description RING-H2 finger protein ATL5H
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016567
IEA
GOA Databaseprotein ubiquitination
GO:0006896
IBA
GOA DatabaseGolgi to vacuole transport
GO:0006623
IBA
GOA Databaseprotein targeting to vacuole
GO:0006511
IBA
GOA Databaseubiquitin-dependent protein catabolic process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0061630
IBA
GOA Databaseubiquitin protein ligase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016020
IBA
IEA
GOA Databasemembrane
GO:0016021
IEA
GOA Databaseintegral component of membrane
GO:0005802
IBA
GOA Databasetrans-Golgi network
GO:0005768
IBA
GOA Databaseendosome
GO:0017119
IBA
GOA DatabaseGolgi transport complex

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001841 Zinc finger, RING-type
IPR013083 Zinc finger, RING/FYVE/PHD-type
IPR044675 E3 ubiquitin-protein ligase RING1-like
Mapman id Description
19.2.2.1.4.3.3.1 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.RING-domain E3 ligase activities.RING-H2-class ligase activities.ATL-subclass ligase