Gene: Zm00001eb237020

General Information

Structural Information

  • Species Zea mays
  • Gene Identifier Zm00001eb237020
  • Transcript Identifier Zm00001eb237020_T001
  • Gene Type Coding gene
  • Location 5 : 133279593-133282877 : positive

Gene Family Information

  • ID HOM05D000390
  • #Genes/#Species 1264/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Zm00001eb237020_T001
  • pid Zm00001eb237020_P001
  • uniprot B3F0L0
  • uniprot C0HEH6
  • uniprot A0A3L6EQT5
  • entrez 103626898
  • refseq NP_001306637.1
  • refseq NM_001319708.1
  • V4_identifier Zm00001d015952

Descriptions

  • Description Zm00001e014151
  • Description E3 ubiquitin-protein ligase
  • Description E3 ubiquitin-protein ligase SINAT4
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016567
IEA
GOA Databaseprotein ubiquitination
GO:0006511
IEA
GOA Databaseubiquitin-dependent protein catabolic process
GO:0006511
IEA
InterProubiquitin-dependent protein catabolic process
GO:0007275
IEA
InterPromulticellular organism development
GO:2000785
ISO
PLAZA Integrative Orthologyregulation of autophagosome assembly AT3G58040

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016740
IEA
GOA Databasetransferase activity
GO:0008270
IEA
GOA Databasezinc ion binding
GO:0016874
IEA
GOA Databaseligase activity
GO:0061630
IBA
GOA Databaseubiquitin protein ligase activity
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
IBA
IEA
GOA Databasecytoplasm
GO:0005737
IEA
InterProcytoplasm
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT4G27880
GO:0005739
ISO
PLAZA Integrative Orthologymitochondrion AT4G27880
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT4G27880

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR018121 Seven-in-absentia protein, TRAF-like domain
IPR013083 Zinc finger, RING/FYVE/PHD-type
IPR008974 TRAF-like
Mapman id Description
19.2.2.1.4.3.5 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.RING-domain E3 ligase activities.E3 ubiquitin ligase (SINA)