Gene: Zm00001eb191790

General Information

Structural Information

  • Species Zea mays
  • Gene Identifier Zm00001eb191790
  • Transcript Identifier Zm00001eb191790_T002
  • Gene Type Coding gene
  • Location 4 : 177406025-177552202 : positive

Gene Family Information

  • ID HOM05D000329
  • #Genes/#Species 1418/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Zm00001eb191790_T002
  • pid Zm00001eb191790_P002
  • uniprot A0A1D6QBH6
  • uniprot A0A1D6QB77
  • uniprot A0A3L6F489
  • uniprot A0A1D6QB69
  • uniprot A0A3L6F520
  • uniprot A0A3L6F6S1
  • uniprot A0A3L6F3W8
  • uniprot A0A1D6QBI1
  • uniprot K7U161
  • uniprot A0A1D6QB71
  • uniprot A0A1D6QBI3
  • uniprot A0A1D6QBI6
  • V4_identifier Zm00001d051963
  • V4_identifier Zm00001d051964
  • V4_identifier Zm00001d051959
  • V4_identifier Zm00001d051961

Descriptions

  • Description Zm00001e023636
  • Description Putative lysine-specific demethylase JMJ16
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0032259
IEA
GOA Databasemethylation
GO:0034721
IEA
GOA Databasehistone H3-K4 demethylation, trimethyl-H3-K4-specific
GO:0016577
IEA
GOA Databasehistone demethylation
GO:0006338
IBA
GOA Databasechromatin remodeling
GO:0006355
ISO
PLAZA Integrative Orthologyregulation of transcription, DNA-templated AT2G38950

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008168
IEA
GOA Databasemethyltransferase activity
GO:0034647
IBA
GOA Databasehistone demethylase activity (H3-trimethyl-K4 specific)
GO:0032452
IBA
GOA Databasehistone demethylase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IBA
IEA
GOA Databasenucleus
GO:0005634
IEA
InterPronucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR003347 JmjC domain
IPR003349 JmjN domain
IPR003889 FY-rich, C-terminal
IPR003888 FY-rich, N-terminal
IPR004198 Zinc finger, C5HC2-type
Mapman id Description
12.3.3.8.4 Chromatin organisation.post-translational histone modification.histone lysine methylation.JmjC group histone demethylase activities.histone demethylase (PKDM7)