Gene: Zm00001eb123510

General Information

Structural Information

  • Species Zea mays
  • Gene Identifier Zm00001eb123510
  • Transcript Identifier Zm00001eb123510_T001
  • Gene Type Coding gene
  • Location 3 : 14444552-14447608 : negative

Gene Family Information

  • ID HOM05D001027
  • #Genes/#Species 591/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Zm00001eb123510_T001
  • pid Zm00001eb123510_P001
  • uniprot A0A3L6FL61
  • uniprot A0A1D6MKZ5
  • uniprot A0A1D6MKZ3
  • uniprot A0A1D6MKZ4
  • uniprot A0A1D6MKZ1
  • uniprot A0A1D6MKZ2
  • uniprot A0A1R3P9Y3
  • uniprot Q6WLH3
  • entrez 542124
  • refseq NP_001105226.1
  • refseq XP_008673421.1
  • refseq NM_001111756.1
  • refseq XM_008675199.1
  • V4_identifier Zm00001d039750

Descriptions

  • Description Zm00001e016829
  • Description MYB-type transcription factor
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006357
ISO
PLAZA Integrative Orthologyregulation of transcription by RNA polymerase II AT1G49950
GO:0006334
IEA
GOA Databasenucleosome assembly
GO:0006334
IEA
InterPronucleosome assembly

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000976
ISO
PLAZA Integrative Orthologytranscription cis-regulatory region binding AT5G67580
GO:0042162
ISO
PLAZA Integrative Orthologytelomeric DNA binding AT5G67580
GO:1990841
ISO
PLAZA Integrative Orthologypromoter-specific chromatin binding AT1G49950
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G67580
GO:0003691
ISS
IEA
GOA Databasedouble-stranded telomeric DNA binding
GO:0003691
IEA
InterProdouble-stranded telomeric DNA binding
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003677
IEA
InterProDNA binding
GO:0042803
ISS
GOA Databaseprotein homodimerization activity
GO:0043047
ISS
GOA Databasesingle-stranded telomeric DNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISS
IEA
GOA Databasenucleus
GO:0032991
ISO
PLAZA Integrative Orthologyprotein-containing complex AT1G49950
GO:0000786
IEA
GOA Databasenucleosome
GO:0000786
IEA
InterPronucleosome
GO:0000785
ISS
GOA Databasechromatin
GO:0000781
IEA
GOA Databasechromosome, telomeric region
GO:0005730
ISS
IEA
GOA Databasenucleolus
GO:0005694
IEA
GOA Databasechromosome

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR017930 Myb domain
IPR009057 Homeobox-like domain superfamily
IPR005818 Linker histone H1/H5, domain H15
IPR036388 Winged helix-like DNA-binding domain superfamily
IPR001005 SANT/Myb domain
IPR044597 Single myb histone 1-6
IPR036390 Winged helix DNA-binding domain superfamily
Mapman id Description
12.3.3.2.1.2.1 Chromatin organisation.post-translational histone modification.histone lysine methylation.class-I histone methyltransferase activities.PRC2 histone methylation complex.associated protein factors.PRC2-recruiting factor (TRB)