Gene: Zm00001eb116250

General Information

Structural Information

  • Species Zea mays
  • Gene Identifier Zm00001eb116250
  • Transcript Identifier Zm00001eb116250_T001
  • Gene Type Coding gene
  • Location 2 : 238235733-238239950 : positive

Gene Family Information

  • ID HOM05D000032
  • #Genes/#Species 5307/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Zm00001eb116250_T001
  • pid Zm00001eb116250_P001
  • uniprot B7ZYK8
  • uniprot C4J594
  • uniprot A0A1D6F8K4
  • uniprot A0A1D6F8J9
  • uniprot A0A3L6FTJ7
  • uniprot A0A3L6FUL4
  • uniprot A0A096RF51
  • entrez 100279527
  • refseq XM_008669575.1
  • refseq XP_008667798.1
  • refseq XP_008667797.1
  • refseq XM_008669576.1
  • V4_identifier Zm00001d007755

Descriptions

  • Description Zm00001e011396
  • Description DEAD-box ATP-dependent RNA helicase 52
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016070
ISO
PLAZA Integrative OrthologyRNA metabolic process Solyc03g052980.3

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003724
IBA
IEA
GOA DatabaseRNA helicase activity
GO:0003724
IEA
InterProRNA helicase activity
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT3G58510
GO:0003676
IEA
GOA Databasenucleic acid binding
GO:0003676
IEA
InterPronucleic acid binding
GO:0005524
IEA
GOA DatabaseATP binding
GO:0005524
IEA
InterProATP binding
GO:0003723
IBA
IEA
GOA DatabaseRNA binding
GO:0004386
IEA
GOA Databasehelicase activity
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0000166
IEA
GOA Databasenucleotide binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT3G58510
GO:0005730
ISO
PLAZA Integrative Orthologynucleolus AT3G58510
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT2G42520
GO:0005777
ISO
PLAZA Integrative Orthologyperoxisome AT3G58510
GO:0005634
IBA
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR044763 Ded1/Dbp1, DEAD-box helicase domain
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR011545 DEAD/DEAH box helicase domain
IPR001650 Helicase, C-terminal
IPR014001 Helicase superfamily 1/2, ATP-binding domain
Mapman id Description
35.1 not assigned.annotated