Gene: Zm00001eb060840
General Information
Structural Information
- Species Zea mays
- Gene Identifier Zm00001eb060840
- Transcript Identifier Zm00001eb060840_T001
- Gene Type Coding gene
- Location 1 : 295016597-295018242 : negative
Gene Family Information
- ID HOM05D003408
- #Genes/#Species 201/99
- Phylogenetic origin
- ID ORTHO05D003949
- #Genes/#Species 197/99
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- tid Zm00001eb060840_T001
- pid Zm00001eb060840_P001
- uniprot A0A1D6L7V9
- uniprot C0HGY6
- uniprot A0A317Y6V9
- uniprot B4F800
- uniprot B4FTB8
- uniprot Q9FQ77
- entrez 103644182
- refseq NM_001301469.1
- refseq NP_001288398.1
- V4_identifier Zm00001d034453
Descriptions
- Description Zm00001e005998
- Description Tryptophan synthase alpha chain chloroplastic
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0042742 | ISO | PLAZA Integrative Orthology | defense response to bacterium | AT3G54640 |
| GO:0009630 | ISO | PLAZA Integrative Orthology | gravitropism | AT3G54640 |
| GO:0052544 | ISO | PLAZA Integrative Orthology | defense response by callose deposition in cell wall | AT3G54640 |
| GO:0006568 | IEA | GOA Database | tryptophan metabolic process | |
| GO:0006568 | IEA | InterPro | tryptophan metabolic process | |
| GO:0000162 | IBA IEA | GOA Database | tryptophan biosynthetic process | |
| GO:0009073 | IEA | GOA Database | aromatic amino acid family biosynthetic process |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016829 | IEA | GOA Database | lyase activity | |
| GO:0033984 | ISO | PLAZA Integrative Orthology | indole-3-glycerol-phosphate lyase activity | AT4G02610 |
| GO:0003824 | IEA | GOA Database | catalytic activity | |
| GO:0003824 | IEA | InterPro | catalytic activity | |
| GO:0004834 | IBA IEA | GOA Database | tryptophan synthase activity | |
| GO:0004834 | IEA | InterPro | tryptophan synthase activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005737 | ISO | PLAZA Integrative Orthology | cytoplasm | AT4G02610 |
| GO:0009570 | ISO | PLAZA Integrative Orthology | chloroplast stroma | AT3G54640 |
| GO:0005829 | IBA | GOA Database | cytosol | |
| GO:0009507 | IBA | GOA Database | chloroplast |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 4.1.5.3.5.1 | Amino acid metabolism.biosynthesis.shikimate family.tryptophan.tryptophan synthase heterodimer.subunit alpha |