Gene: Zm00001eb057040

General Information

Structural Information

  • Species Zea mays
  • Gene Identifier Zm00001eb057040
  • Transcript Identifier Zm00001eb057040_T001
  • Gene Type Coding gene
  • Location 1 : 282336708-282346551 : negative

Gene Family Information

  • ID HOM05D002650
  • #Genes/#Species 259/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Zm00001eb057040_T001
  • pid Zm00001eb057040_P001
  • uniprot A0A1D6L3Z0
  • uniprot A0A1D6L405
  • uniprot A0A1D6L3Z1
  • uniprot A0A1D6L406
  • uniprot A0A1D6L403
  • uniprot A0A1D6L401
  • uniprot A0A1D6L3Z9
  • uniprot A0A317Y6Q5
  • uniprot A0A1D6L3Z4
  • uniprot A0A1D6L3Z5
  • uniprot A0A1D6L3Z2
  • uniprot A0A1D6L3Z3
  • entrez 100273495
  • refseq XP_008665405.1
  • refseq XM_008667183.1
  • V4_identifier Zm00001d033993

Descriptions

  • Description Zm00001e005656
  • Description DExH-box ATP-dependent RNA helicase DExH16 mitochondrial
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009555
ISO
PLAZA Integrative Orthologypollen development AT4G14790
GO:0009561
ISO
PLAZA Integrative Orthologymegagametogenesis AT4G14790
GO:0016070
ISO
PLAZA Integrative OrthologyRNA metabolic process AT4G14790
GO:0000965
IBA
GOA Databasemitochondrial RNA 3'-end processing
GO:0006401
IBA
GOA DatabaseRNA catabolic process
GO:0032508
IEA
GOA DatabaseDNA duplex unwinding
GO:0010929
IEA
GOA Databasepositive regulation of auxin mediated signaling pathway
GO:0009939
IEA
GOA Databasepositive regulation of gibberellic acid mediated signaling pathway
GO:0009651
IEA
GOA Databaseresponse to salt stress
GO:0080038
IEA
GOA Databasepositive regulation of cytokinin-activated signaling pathway
GO:1902584
IEA
GOA Databasepositive regulation of response to water deprivation
GO:1901002
IEA
GOA Databasepositive regulation of response to salt stress

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005524
IEA
GOA DatabaseATP binding
GO:0005524
IEA
InterProATP binding
GO:0003724
IBA
IEA
GOA DatabaseRNA helicase activity
GO:0003724
IEA
InterProRNA helicase activity
GO:0016817
IEA
GOA Databasehydrolase activity, acting on acid anhydrides
GO:0016817
IEA
InterProhydrolase activity, acting on acid anhydrides
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0003678
IEA
GOA DatabaseDNA helicase activity
GO:0004386
IEA
GOA Databasehelicase activity
GO:0000166
IEA
GOA Databasenucleotide binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0042645
IEA
GOA Databasemitochondrial nucleoid
GO:0005739
ISO
PLAZA Integrative Orthologymitochondrion AT4G14790
GO:0045025
IBA
GOA Databasemitochondrial degradosome
GO:0005759
IEA
GOA Databasemitochondrial matrix

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR022192 Mitochondrial degradasome RNA helicase subunit, C-terminal domain
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR001650 Helicase, C-terminal
IPR041082 Suv3, C-terminal domain 1
IPR044774 Suv3, DEXQ-box helicase domain
Mapman id Description
35.1 not assigned.annotated