Gene: Zm00001eb041390

General Information

Structural Information

  • Species Zea mays
  • Gene Identifier Zm00001eb041390
  • Transcript Identifier Zm00001eb041390_T001
  • Gene Type Coding gene
  • Location 1 : 217938698-217939674 : positive

Gene Family Information

  • ID HOM05D000001
  • #Genes/#Species 35287/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Zm00001eb041390_T001
  • pid Zm00001eb041390_P001
  • uniprot A0A1D6IKH3
  • uniprot A0A3L6E5W9
  • uniprot B6TYW3
  • uniprot A0A317YJ66
  • uniprot B4FBD6
  • entrez 100192110
  • refseq NM_001137533.1
  • refseq NP_001131005.1
  • V4_identifier Zm00001d032186

Descriptions

  • Description Zm00001e004122
  • Description Ribonuclease 3
  • Description Ribonuclease 1
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009867
ISO
PLAZA Integrative Orthologyjasmonic acid mediated signaling pathway AT2G02990
GO:0007568
ISO
PLAZA Integrative Orthologyaging AT2G02990
GO:0060866
ISO
PLAZA Integrative Orthologyleaf abscission Solyc05g007940.3
GO:0010150
ISO
PLAZA Integrative Orthologyleaf senescence Solyc05g007940.3
GO:0006401
IBA
GOA DatabaseRNA catabolic process
GO:0090501
IEA
GOA DatabaseRNA phosphodiester bond hydrolysis
GO:0016036
IEA
GOA Databasecellular response to phosphate starvation
GO:0009718
IEA
GOA Databaseanthocyanin-containing compound biosynthetic process
GO:0009611
IEA
GOA Databaseresponse to wounding
GO:0090502
IEA
GOA DatabaseRNA phosphodiester bond hydrolysis, endonucleolytic

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004521
IBA
GOA Databaseendoribonuclease activity
GO:0005515
ISO
PLAZA Homology (enrichment)protein binding HOM05D000001
GO:0033897
IEA
GOA Databaseribonuclease T2 activity
GO:0033897
IEA
InterProribonuclease T2 activity
GO:0003723
IEA
GOA DatabaseRNA binding
GO:0003723
IEA
InterProRNA binding
GO:0004540
IEA
GOA Databaseribonuclease activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005576
IBA
IEA
GOA Databaseextracellular region
GO:0005886
IEA
GOA Databaseplasma membrane

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001568 Ribonuclease T2-like
IPR036430 Ribonuclease T2-like superfamily
IPR033697 Ribonuclease T2, eukaryotic
Mapman id Description
16.5.11.1 RNA processing.RNA modification.tRNA-derived fragment biogenesis.T2-type RNase (RNS)